A listing [ by-lead-author (alphabetical) ] is also available.
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Published in 2024 Batta-Lona, P., Gardner, K., Questel, J.M., Thorrold, S.R., Llopiz, P.H., Wiebe, P.H., Bucklin, A. 2024.
Salps in the NW Atlantic Slope Water: metabarcoding and compound-specific stable isotope analysis of diet diversity and trophic interactions.
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Bucklin, A., Batta-Lona, P., Questel, J.M., McMonagle, H., Wojcick, M, et-al 2024.
Metabarcoding and morphological analysis of diets of mesopelagic fishes in the NW Atlantic Slope Water.
Sec. Marine Molecular Biology and Ecology |
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Di Capua, I., Luise, F., Zampicinini, G., et-al 2024.
Integrative approach to monitoring metazoan diversity and distribution in two Mediterranean coastal sites through morphology and organismal eDNA.
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Govender, A., et-al 2024.
Net type, tow duration and day/night sampling effects on the composition of marine zooplankton derived from metabarcoding.
Metabarcoding and Metagenomics |
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O'Brien, T.D., Blanco-Bercial, L., Questel, J.M., Batta-Lona, P., Bucklin, A. 2024.
MetaZooGene Atlas and Database: Reference Sequences for Marine Ecosystems.
DNA Barcoding Methods in Molecular Biology |
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Perhirin, M., Godfrey, J., Johnson, R., Blanco-Bercial, L., Avata, S.D. 2024.
Morphological and taxonomic diversity of mesozooplankton is an important driver of carbon export fluxes in the ocean.
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Published in 2023 Beckmann, L.M., Soto-Angel, J.J., Hosia, A., Martell, L. 2023.
Odd family reunion: DNA barcoding reveals unexpected relationship between three hydrozoan species.
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Bucklin, A., Questel, J.M., Batta-Lona, P., et-al 2023.
Population genetic diversity and structure of the euphausiids Thysanoessa inermis and T. raschii in the Arctic Ocean: inferences from COI barcodes.
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Choo, LQ, Spagliardi, G., Malinsky, M., Choquet, M., Goetze, E., Hoarau, G., Peijnenburg, K.T.C.A. 2023.
Genome-wide phylogeography reveals cryptic speciation in the circumglobal planktonic calcifier Limacina bulimoides.
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Gonzalez, C.E., Blanco-Bercial, L., Escribano, R., et-al 2023.
Revealing zooplankton diversity in the midnight zone.
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Hirai, J., Katakura, S., Nagai, S. 2023.
Comparisons of genetic population structures of copepods Pseudocalanus spp. in the Okhotsk Sea: the first record of P. acuspes in coastal waters off Japan.
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Huys, R., Savchenko, A.S., Kosobokova, K. 2023.
Discovery of a new species and host record of Holophryxus Richardson, 1905 (Isopoda: Dajidae) from the central Arctic: a model of enhanced descriptive standards for epicaridean isopods.
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Matthews, S.A., Blanco-Bercial, L. 2023.
Divergent patterns of zooplankton connectivity in the epipelagic and mesopelagic zones of the eastern North Pacific.
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Sildever, S., et-al 2023.
Eight years of weekly eDNA monitoring in the North-Western Pacific.
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Suter, L., et-al 2023.
Environmental DNA of Antarctic krill (Euphausia superba): Measuring DNA fragmentation adds a temporal aspect to quantitative surveys.
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Watanabe, K.W., Hirai, J., et-al 2023.
Improving taxonomic classification of marine zooplankton by molecular approach: registration of taxonomically verified 18S and 28S rRNA gene sequences.
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Published in 2022 Bucklin, A., Batta-Lona, P., Questel, J.M., Wiebe, P.H., Richardson, D.E., Copley, N.J., O'Brien, T.D. 2022.
COI Metabarcoding of Zooplankton Species Diversity for Time-Series Monitoring of the NW Atlantic Continental Shelf.
Frontiers in Marine Science - Marine Ecosystem Ecology |
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Choo, LQ, Bal, T.M.P., Goetze, E., Peijnenburg, K.T.C.A. 2022.
Oceanic dispersal barriers in a holoplanktonic gastropod.
Journal of Evolutionary Biology |
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Di Capua, I., D'Angiolo, R., Piredda, R., Minucci, C., Boero, F., Uttieri, M., Carotenuto, Y. 2022.
From Phenotypes to Genotypes and Back: Toward an Integrated Evaluation of Biodiversity in Calanoid Copepods.
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Hirai, J., Cheng, F., Itoh, H., Tadokoro, K., Lemay, M.A., Hunt, B.P.V., Tsuda, A. 2022.
Molecular and morphological analyses to improve taxonomic classification of Metridia lucens/pacifica in the North Pacific.
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Huggett, J., et-al 2022.
Metabarcoding of zooplankton to derive indicators of pelagic ecosystem status.
South African Journal of Science |
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Takahashi, K., Itoh, H., Hirai, J., Tadokoro, K., Nishiuchi, K. 2022.
A new species of genus Sapphirina (Copepoda, Cyclopoida) from the Kuroshio Extension region in the western North Pacific Ocean.
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Ueda, H., Itoh, H., Hirai, J., Hidaka, K. 2022.
Paracalanus orientalis n. sp. (Copepoda, Calanoida), formerly referred to as P. parvus in Japanese coastal waters.
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Yebra, L., et-al 2022.
Assessment of short-term spatio-temporal variability in the structure of mesozooplankton communities integrating microscopy and multigene high-throughput sequencing.
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Published in 2021 Bucklin, A., Peijnenburg, K.T.C.A., Kosobokova, K., O'Brien, T.D., Blanco-Bercial, L., Cornils, A., Falkenhaug, T., Hopcroft, R.R., Hosia, A., Laakmann, S., Li, C., Martell, L., Questel, J.M., Wall-Palmer, D., Wang, M., Wiebe, P.H., Weydmann, A. 2021.
Toward a global reference database of COI barcodes for marine zooplankton.
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Bucklin, A., Questel, J.M., Blanco-Bercial, L., Frenzel, A., Smolenack, S.B., Wiebe, P.H. 2021.
Population connectivity of the euphausiid, Stylocheiron elongatum, in the Gulf Stream (NW Atlantic Ocean) in relation to COI barcode diversity of Stylocheiron species.
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Bucklin, A., Peijnenburg, K.T.C.A., Kosobokova, K., Machida, R.J. 2021.
New insights into biodiversity, biogeography, ecology, and evolution of marine zooplankton based on molecular approaches. Introduction to the Themed Set.
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Di Capua, I., Piredda, R., Mazzocchi, M.G., Zingone, A. 2021.
Metazoan diversity and seasonality through eDNA metabarcoding at a Mediterranean long term ecological research site.
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Hirai, J., et-al 2021.
DNA/RNA metabarcoding and morphological analysis of epipelagic copepod communities in the Izu Ridge off the southern coast of Japan.
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Hirai, J., et-al 2021.
Characterization of diversity and community structure of small planktonic copepods in the Kuroshio region off Japan using a metabarcoding approach.
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Machida, R.J., et-al 2021.
Bias in the taxonomic methods used to estimate the zooplankton diversity.
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Matthews, S.A., Goetze, E., Ohman, M.D. 2021.
Recommendations for interpreting zooplankton metabarcoding observations and integrating molecular methods with morphological analyses.
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Pappalardo, P., Collins AG, A.G., et-al 2021.
The role of taxonomic expertise in interpretation of metabarcoding studies.
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Parry, H.E., Atkinson, A., Somerfield, P.J., Lindeque, P.K. 2021.
What does conventional plankton monitoring miss? A metabarcoding comparison of taxonomic richness, composition and density between the water column and the benthic boundary layer.
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Questel, J.M., Hopcroft, R.R., DeHart, H.M., Smoot, C.A., Kosobokova, K., Bucklin, A. 2021.
Metabarcoding of zooplankton diversity within the Chukchi Borderlands, Arctic Ocean: Improved resolution from multi-gene markers and region-specific DNA databases.
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Published in 2020 Blanco-Bercial, L. 2020.
Metabarcoding analyses and seasonality of the zooplankton community at BATS.
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DeHart, H.M., Blanco-Bercial, L., Passacantando, M., Questel, J.M., Bucklin, A. 2020.
Pathways of Pelagic Connectivity: Eukrohnia hamata (Chaetognatha) in the Arctic Ocean.
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Hirai, J., Tachibana, A., Tsuda, A. 2020.
Large-scale metabarcoding analysis of epipelagic and mesopelagic copepods in the Pacific.
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Kolbasova, G., Kosobokova, K., Neretina, T. 2020.
Bathy- and mesopelagic annelida from the Arctic Ocean: Description of new, redescriptoin of known and notes on some "cosmopolitan" species.
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Laakmann, S., Blanco-Bercial, L., Cornils, A. 2020.
The crossover from microscopy to genes in marine diversity - from species to assemblages in marine pelagic copepods.
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Laroche, O., Kersten, O., Smith, C.R., Goetze, E. 2020.
Environmental DNA surveys detect distinct metazoan communities across abyssal plains and seamounts in the western Clarion Clipperton Zone.
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Parry, H.E., Atkinson, A., Somerfield, P.J., Lindeque, P.K. 2020.
A metabarcoding comparison of taxonomic richness and composition between the water column and the benthic boundary layer.
ICES Journal of Marine Science |
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Peijnenburg, K.T.C.A., Janssen, A.W., Wall-Palmer, D., Goetze, E., Maas, A.E., Todd, J.A., Marletaz, F. 2020.
The origin and diversification of pteropods precede past pertubations int he Earth's carbon cycle.
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Wall-Palmer, D., Janssen, A.W., Goetze, E., Choo, LQ, Mekkes, L, Peijnenburg, K.T.C.A. 2020.
Fossil-calibrated molecular phylogeny of atlantid heteropods (Gastropoda, Pterotracheoidea).
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Yeh, H.D., Questel, J.M., Maas, K.R., Bucklin, A. 2020.
Metabarcoding analysis of prey and microbiota composition of the copepod Calanus finmarchicus in the North Atlantic Ocean.
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Published in 2019 Bucklin, A., Yeh, H.D., Questel, J.M., Richardson, D.E., Reese, B., Copley, N.J., Wiebe, P.H. 2019.
Time-series metabarcoding analysis of zooplankton diversity of the NW Atlantic continental shelf.
ICES Journal of Marine Science |
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Burridge, A.K., Van der Hulst, R., Goetze, E., Peijnenburg, K.T.C.A. 2019.
Assessing species boundaries in the open sea: an integrative taxonomic approach to the pteropod genus Diacavolinia.
Zoological Journal of the Linnean Society |
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deWaard, J.R., et-al 2019.
A reference library for Canadian invertebrates with 1.5 million barcodes, voucher specimens, and DNA samples.
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Published in 2018 Aylagas, E., Borja, A., Muxika, I., Rodriguez-Ezpeleta, N. 2018.
Adapting metabarcoding-based benthic biomonitoring into routine marine ecological status assessment networks.
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Gunther, B., Knebelsberger, T., Neumann, H., Laakmann, S., Martinez Arbizu, P. 2018.
Metabarcoding of marine environmental DNA based on mitochondrial and nuclear genes.
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Morabito, G., et-al 2018.
Plankton dynamics across the freshwater, transitional and marine research sites of the LTER-Italy nework. Patterns, flucuations, drivers.
Science of the Total Environment |
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Musialik-Koszarowska, M., Dzierzbicka-Glowacka, L., Weydmann, A. 2018.
Influence of environmental factors on the population dynamics of key zooplankton species in the Gulf of Gdansk (Southern Baltic Sea).
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Wall-Palmer, D., Peijnenburg, K.T.C.A., et-al 2018.
Biogeography and genetic diversity of the atlantid heterpods.
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Published in 2017 Dornelas, M., et-al 2017.
BioTIME: A database of biodiversity time series for the Anthropocene.
Global Ecology and Biogeography |
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Hirai, J., Kasai, H., Nagai, S. 2017.
Cryptic zooplankton diversity revealed by a metagenatic approach to monitoring metazoan communities in the coastal waters of the Okhotsk Sea, northeastern Hokkaido.
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Hosia, A., Falkenhaug, T., Baxter, E.J., Pages, F. 2017.
Abundance, distribution and diversity of gelatinous predators along the northern Mid-Atlantic Ridge: A comparison of different sampling methodologies.
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Machida, R.J., Leray, M., Ho, S-L., Knowlton, N. 2017.
Data Descriptor: Metazoan mitochondrial gene sequence reference datasets for taxonomic assignment of environmental samples.
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Noblezada, M.M., Miyamoto, H., Campos, W.L., Yusoff, F.M.D., Nishida, S. 2017.
Phylogeny of the planktonic shrimp Lucifer hanseni Nobili 1905 in the Indo-Malayan Archipelago.
Journal of the Marine Biological Association of the United Kingdom |
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Sommer, S.A., Van Woudenberg, L., Lenz, P.H., Cepeda, G.D., Goetze, E. 2017.
Vertical gradients in species richness and community composition across the twilight zone in the North Pacific Subtropical Gyre.
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Published in 2016 Bucklin, A., Lindeque, P.K., Rodriguez-Ezpeleta, N., Albaina, A., Lehtiniemi, M. 2016.
Metabarcoding of marine zooplankton: prospects, progress and pitfalls.
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Verheye, H.M., Lamont, T., Huggett, J., Kreiner, A., Hampton, I. 2016.
Plankton productivity of the Benguela Current Large Marine Ecosystem (BCLME).
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Published in 2015 Deagle, B.E., et-al 2015.
Antarctic krill population genomics: apparent panmixia, but genome complexity and large population size muddy the water.
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Published in 2014 Blanco-Bercial, L., Cornils, A., Copley, N.J., Bucklin, A. 2014.
DNA barcoding of marine copepods: Assessent of analytical approaches to species identification.
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Cheng, F., Wang, M., Li, C., Sun, S. 2014.
Zooplankton community analysis int he Changjiang River estuary by single-gene-targeted metagenomics.
Chinese Journal of Oceanology and Limnology |
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Published in 2013 Lindeque, P.K., Parry, H.E., Harmer, R.A., Somerfield, P.J., Atkinson, A. 2013.
Next generation sequencing reveals the hidden diversity of zooplankton assemblages.
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Published in 2012 Cepeda, G.D., Blanco-Bercial, L., Bucklin, A., Beron, C.M., Vinas, M.D. 2012.
Molecular systematic of three species of Oithona (Copepoda, Cyclopoida) from the Atlantic Ocean: Comparative analysis using 28S rDNA.
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Published in 2011 Kosobokova, K., Hopcroft, R.R., Hirche, H.J. 2011.
Patterns of zooplankton diveristy through the depths of the Arctic's central basins.
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