A by-publication-year (newest-to-oldest) list is also available.


Aylagas, E., Borja, A., Muxika, I., Rodriguez-Ezpeleta, N.   2018.   Adapting metabarcoding-based benthic biomonitoring into routine marine ecological status assessment networks.   Ecological Indicators   95: 194-202.   doi.org/10.1016/j.ecolind.2018.07.044

Journal controls Access (goto DOI-link)       Literature-DB:  L000407    


Blanco-Bercial, L.   2020.   Metabarcoding analyses and seasonality of the zooplankton community at BATS.   Front. Mar. sci   24 March 2020.   doi.org/10.3389/fmars.2020.00173

OPEN ACCESS   [   PDF   |   via DOI-link  ]       Literature-DB:  L000451    


Blanco-Bercial, L., Cornils, A., Copley, N.J., Bucklin, A.   2014.   DNA barcoding of marine copepods: Assessent of analytical approaches to species identification.   PLOS Currents Tree of Life   (2014 Jun 23) Edition 1.   doi.org/10.1371/currents.tol.cdf8b74881f87e3b01d56b43791626d2

OPEN ACCESS   [   PDF   |   via DOI-link  ]       Literature-DB:  L000387    


Bucklin, A., Lindeque, P.K., Rodriguez-Ezpeleta, N., Albaina, A., Lehtiniemi, M.   2016.   Metabarcoding of marine zooplankton: prospects, progress and pitfalls.   Journal of Plankton Research   38: 393-400.   doi.org/10.1093/plankt/fbw023

OPEN ACCESS   [   PDF   |   via DOI-link  ]       Literature-DB:  L000375    


Bucklin, A., Yeh, H.D., Questel, J.M., Richardson, D.E., Reese, B., Copley, N.J., Wiebe, P.H.   2019.   Time-series metabarcoding analysis of zooplankton diversity of the NW Atlantic continental shelf.   ICES Journal of Marine Science   76: 1162-1176.   doi.org/10.1093/icesjms/fsz021

Journal controls Access (goto DOI-link)       Literature-DB:  L000452     [ no PDF available ]


Bucklin, A., Peijnenburg, K.T.C.A., Kosobokova, K., O'Brien, T.D., Blanco-Bercial, L., Cornils, A., Falkenhaug, T., Hopcroft, R.R., Hosia, A., Laakmann, S., Li, C., Martell, L., Questel, J.M., Wall-Palmer, D., Wang, M., Wiebe, P.H., Weydmann, A.   2021.   Toward a global reference database of COI barcodes for marine zooplankton.   Mar Biol   168, 78.   doi.org/10.1007/s00227-021-03887-y

OPEN ACCESS   [   PDF   |   via DOI-link  ]       Literature-DB:  L000471    


Burridge, A.K., Van der Hulst, R., Goetze, E., Peijnenburg, K.T.C.A.   2019.   Assessing species boundaries in the open sea: an integrative taxonomic approach to the pteropod genus Diacavolinia.   Zoological Journal of the Linnean Society   187:1016-1040.   doi.org/10.1093/zoolinnean/zlz049

OPEN ACCESS   [   PDF   |   via DOI-link  ]       Literature-DB:  L000454    


Cepeda, G.D., Blanco-Bercial, L., Bucklin, A., Beron, C.M., Vinas, M.D.   2012.   Molecular systematic of three species of Oithona (Copepoda, Cyclopoida) from the Atlantic Ocean: Comparative analysis using 28S rDNA.   Plos ONE   7(4): e35861.   doi.org/10.1371/journal.pone.0035861

OPEN ACCESS   [   PDF   |   via DOI-link  ]       Literature-DB:  L000385    


Cheng, F., Wang, M., Li, C., Sun, S.   2014.   Zooplankton community analysis int he Changjiang River estuary by single-gene-targeted metagenomics.   Chinese Journal of Oceanology and Limnology   32(4): 858-870.   doi.org/10.1007/s00343-014-3251-y

Journal controls Access (goto DOI-link)       Literature-DB:  L000411    


Deagle, B.E., et-al   2015.   Antarctic krill population genomics: apparent panmixia, but genome complexity and large population size muddy the water.   Molecular Ecology   24: 4943-4959.   doi.org/10.1111/mec.13370

Journal controls Access (goto DOI-link)       Literature-DB:  L000460    


DeHart, H.M., Blanco-Bercial, L., Passacantando, M., Questel, J.M., Bucklin, A.   2020.   Pathways of Pelagic Connectivity: Eukrohnia hamata (Chaetognatha) in the Arctic Ocean.   Frontiers in Marine Science   7(396):1-16.   doi.org/10.3389/fmars.2020.00396

OPEN ACCESS   [   PDF   |   via DOI-link  ]       Literature-DB:  L000455    


deWaard, J.R., et-al   2019.   A reference library for Canadian invertebrates with 1.5 million barcodes, voucher specimens, and DNA samples.   Nature Scientific Data   6:308.   doi.org/10.1038/s41597-019-0320-2

OPEN ACCESS   [   PDF   |   via DOI-link  ]       Literature-DB:  L000461    


Dornelas, M., et-al   2017.   BioTIME: A database of biodiversity time series for the Anthropocene.   Global Ecology and Biogeography   27:760786.   doi.org/10.1111/geb.12729

OPEN ACCESS   [   PDF   |   via DOI-link  ]       Literature-DB:  L000394    


Gunther, B., Knebelsberger, T., Neumann, H., Laakmann, S., Martinez Arbizu, P.   2018.   Metabarcoding of marine environmental DNA based on mitochondrial and nuclear genes.   Nature Scientific Reports   8:14822.   doi.org/10.1038/s41598-018-32917-x

OPEN ACCESS   [   PDF   |   via DOI-link  ]       Literature-DB:  L000386    


Hirai, J., Kasai, H., Nagai, S.   2017.   Cryptic zooplankton diversity revealed by a metagenatic approach to monitoring metazoan communities in the coastal waters of the Okhotsk Sea, northeastern Hokkaido.   Frontiers in Marine Science   4:379.   doi.org/10.3389/fmars.2017.00379

OPEN ACCESS   [   PDF   |   via DOI-link  ]       Literature-DB:  L000393    


Hirai, J., Tachibana, A., Tsuda, A.   2020.   Large-scale metabarcoding analysis of epipelagic and mesopelagic copepods in the Pacific.   PLOS ONE   15(5):e0233189.   doi.org/10.1371/journal.pone.0233189

OPEN ACCESS   [   PDF   |   via DOI-link  ]       Literature-DB:  L000456    


Hosia, A., Falkenhaug, T., Baxter, E.J., Pages, F.   2017.   Abundance, distribution and diversity of gelatinous predators along the northern Mid-Atlantic Ridge: A comparison of different sampling methodologies.   PLOS ONE   12(11):e0187491.   doi.org/10.1371/journal.pone.0187491

OPEN ACCESS   [   PDF   |   via DOI-link  ]       Literature-DB:  L000388    


Kolbasova, G., Kosobokova, K., Neretina, T.   2020.   Bathy- and mesopelagic annelida from the Arctic Ocean: Description of new, redescriptoin of known and notes on some "cosmopolitan" species.   Deep-Sea Research I   165: 103327.   doi.org/10.1016/j.dsr.2020.103327

Journal controls Access (goto DOI-link)       Literature-DB:  L000463    


Kosobokova, K., Hopcroft, R.R., Hirche, H.J.   2011.   Patterns of zooplankton diveristy through the depths of the Arctic's central basins.   Marine Biodiversity   41: 29-50.   doi.org/10.1007/s12526-010-0057-9

Journal controls Access (goto DOI-link)       Literature-DB:  L000412    


Laakmann, S., Blanco-Bercial, L., Cornils, A.   2020.   The crossover from microscopy to genes in marine diversity - from species to assemblages in marine pelagic copepods.   Phil. Trans. R. Soc. B   375: 20190446.   doi.org/10.1098/rstb.2019.0446

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Laroche, O., Kersten, O., Smith, C.R., Goetze, E.   2020.   Environmental DNA surveys detect distinct metazoan communities across abyssal plains and seamounts in the western Clarion Clipperton Zone.   Molecular Ecology   in press.   doi.org/10.1111/mec.15484

OPEN ACCESS   [   PDF   |   via DOI-link  ]       Literature-DB:  L000458    


Lindeque, P.K., Parry, H.E., Harmer, R.A., Somerfield, P.J., Atkinson, A.   2013.   Next generation sequencing reveals the hidden diversity of zooplankton assemblages.   PLos ONE   8(11):e81327.   doi.org/10.1371/journal.pone.0081327

OPEN ACCESS   [   PDF   |   via DOI-link  ]       Literature-DB:  L000389    


Machida, R.J., Leray, M., Ho, S-L., Knowlton, N.   2017.   Data Descriptor: Metazoan mitochondrial gene sequence reference datasets for taxonomic assignment of environmental samples.   Scientific Data   4:170027.   doi.org/10.1038/sdata.2017.27

OPEN ACCESS   [   PDF   |   via DOI-link  ]       Literature-DB:  L000406    


Morabito, G., et-al   2018.   Plankton dynamics across the freshwater, transitional and marine research sites of the LTER-Italy nework. Patterns, flucuations, drivers.   Science of the Total Environment   627: 373-387.   doi.org/10.1016/j.scitotenv.2018.01.153

Journal controls Access (goto DOI-link)       Literature-DB:  L000409    


Musialik-Koszarowska, M., Dzierzbicka-Glowacka, L., Weydmann, A.   2018.   Influence of environmental factors on the population dynamics of key zooplankton species in the Gulf of Gdansk (Southern Baltic Sea).   Oceanologia   (2018).   doi.org/10.1016/j.oceano.2018.06.001

OPEN ACCESS   [   PDF   |   via DOI-link  ]       Literature-DB:  L000390    


Noblezada, M.M., Miyamoto, H., Campos, W.L., Yusoff, F.M.D., Nishida, S.   2017.   Phylogeny of the planktonic shrimp Lucifer hanseni Nobili 1905 in the Indo-Malayan Archipelago.   Journal of the Marine Biological Association of the United Kingdom   97(1): 129-140.   doi.org/10.1017/S0025315416000163

Journal controls Access (goto DOI-link)       Literature-DB:  L000410    


Parry, H.E., Atkinson, A., Somerfield, P.J., Lindeque, P.K.   2020.   A metabarcoding comparison of taxonomic richness and composition between the water column and the benthic boundary layer.   ICES Journal of Marine Science   .   doi.org/10.1093/icesjms/fsaa228

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Peijnenburg, K.T.C.A., Janssen, A.W., Wall-Palmer, D., Goetze, E., Maas, A.E., Todd, J.A., Marletaz, F.   2020.   The origin and diversification of pteropods precede past pertubations int he Earth's carbon cycle.   PNAS   117(41): 25609-25617.   doi.org/10.1073/pnas.1920918117

Journal controls Access (goto DOI-link)       Literature-DB:  L000466    


Questel, J.M., Hopcroft, R.R., DeHart, H.M., Smoot, C.A., Kosobokova, K., Bucklin, A.   2021.   Metabarcoding of zooplankton diversity within the Chukchi Borderlands, Arctic Ocean: Improved resolution from multi-gene markers and region-specific DNA databases.   Marine Biodiversity   51:4.   doi.org/10.1007/s12526-020-01136-x

Journal controls Access (goto DOI-link)       Literature-DB:  L000470    


Sommer, S.A., Van Woudenberg, L., Lenz, P.H., Cepeda, G.D., Goetze, E.   2017.   Vertical gradients in species richness and community composition across the twilight zone in the North Pacific Subtropical Gyre.   Molecular Ecology   2017: 1-21.   doi.org/10.1111/mec.14286

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Verheye, H.M., Lamont, T., Huggett, J., Kreiner, A., Hampton, I.   2016.   Plankton productivity of the Benguela Current Large Marine Ecosystem (BCLME).   Environmental Development   17: 75-92.   doi.org/10.1016/j.envdev.2015.07.011

Journal controls Access (goto DOI-link)       Literature-DB:  L000408    


Wall-Palmer, D., Peijnenburg, K.T.C.A., et-al   2018.   Biogeography and genetic diversity of the atlantid heterpods.   Progress in Oceanography   160(2018): 1-25.   doi.org/10.1016/j.pocean.2017.11.004

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Wall-Palmer, D., Janssen, A.W., Goetze, E., Choo, LQ, Mekkes, L, Peijnenburg, K.T.C.A.   2020.   Fossil-calibrated molecular phylogeny of atlantid heteropods (Gastropoda, Pterotracheoidea).   BMC Evolutionary Biology   20:124.   doi.org/10.1186/s12862-020-01682-9

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Yeh, H.D., Questel, J.M., Maas, K.R., Bucklin, A.   2020.   Metabarcoding analysis of prey and microbiota composition of the copepod Calanus finmarchicus in the North Atlantic Ocean.   Deep Sea Research II   .   doi.org/10.1016/j.dsr2.2020.104738

Journal controls Access (goto DOI-link)       Literature-DB:  L000453     [ no PDF available ]