MZGdb Atlas Squaliformes (Indian Ocean)

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Squaliformes of the Indian Ocean There are 65 species of Squaliformes that are commonly found in the Indian Ocean. Information on the COI barcoding* status of these species is presented in the table below.*
MODE A	*All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):* Of the 65 total species, 54 of these species (83%) have COI barcodes (from this or any ocean). There are a total of 1231 "any ocean" COI barcode records available for this ocean and taxa group. All available taxa group COI barcodes will be included in the Mode A downloads.
MODE B	*Regional COI barcodes for this taxa group (includes only those collected in the* Indian Ocean region):** Of the 65 total species, 0 of these species (0%) have Indian Ocean-collected COI barcodes. There are a total of 1 "Indian Ocean-collected" COI barcodes available for this taxa group. In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
Uncoded Species	Of the 65 total species in this region, 11 species do not have any COI barcodes (from any region).

Barcoding progress summary for the Indian Ocean region, out of a total of 65 possible species:

There are COI barcodes for 54 species ( 83% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).

There are 12S barcodes for 41 species ( 63% coverage ), of which 1 species have barcodes sampled inside this region ( 1% coverage ).

There are 16S barcodes for 46 species ( 70% coverage ), of which 2 species have barcodes sampled inside this region ( 3% coverage ).

There are 18S barcodes for 4 species ( 6% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).

There are 28S barcodes for 6 species ( 9% coverage ), of which 1 species have barcodes sampled inside this region ( 1% coverage ).

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Quality Control: I have removed 1 WoRMS-identified "non-marine" species,
which are not included in the Total Species count above. [ Show me a list of removed brackish species ]

Squaliformes of the Indian Ocean

Taxa Name	Taxa Level	Barcode Data?	Number of Barcodes from *any* ocean	Number of Barcodes from *this region*	Barcode Locations and Species Occurence Map	MZGdb Atlas v2023-m07-15 2023-Jul-20
Centrophorus atromarginatus	Species (1)	COI 12S 16S 18S 28S	COI = 11 12S = 1 16S = 8 18S = 0 28S = 0	COI = 5 12S = 0 16S = 7 18S = 0 28S = 0		accepted T5013006 R:1:0:0:0
Centrophorus granulosus	Species (2)	COI 12S 16S 18S 28S	COI = 32 12S = 4 16S = 8 18S = 0 28S = 2	COI = 3 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013007 R:1:0:0:0
Centrophorus harrissoni	Species (3)	COI 12S 16S 18S 28S	COI = 21 12S = 0 16S = 1 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013008 R:1:0:0:0
Centrophorus isodon	Species (4)	COI 12S 16S 18S 28S	COI = 6 12S = 0 16S = 2 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013009 R:1:0:0:0
Centrophorus longipinnis	Species (5)	COI 12S 16S 18S 28S	COI = 1 12S = 0 16S = 0 18S = 0 28S = 0	COI = 1 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5027834 R:1:0:0:0
Centrophorus lusitanicus	Species (6)	COI 12S 16S 18S 28S	COI = 1 12S = 0 16S = 1 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013010 R:1:0:0:0
Centrophorus moluccensis	Species (7)	COI 12S 16S 18S 28S	COI = 26 12S = 1 16S = 3 18S = 0 28S = 0	COI = 2 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013011 R:1:0:0:0
Centrophorus squamosus	Species (8)	COI 12S 16S 18S 28S	COI = 44 12S = 3 16S = 18 18S = 0 28S = 13	COI = 8 12S = 0 16S = 2 18S = 0 28S = 3		accepted T5013013 R:1:0:0:0
Centrophorus tessellatus	Species (9)	COI 12S 16S 18S 28S	COI = 0 12S = 1 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T5017704 R:1:0:0:0
Centrophorus uyato	Species (10)	COI 12S 16S 18S 28S	COI = 32 12S = 0 16S = 3 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013014 R:1:0:0:0
Centrophorus westraliensis	Species (11)	COI 12S 16S 18S 28S	COI = 1 12S = 0 16S = 0 18S = 0 28S = 0	COI = 1 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5027835 R:1:0:0:0
Centrophorus zeehaani	Species (12)	COI 12S 16S 18S 28S	COI = 30 12S = 0 16S = 5 18S = 0 28S = 0	COI = 18 12S = 0 16S = 4 18S = 0 28S = 0		accepted T5013015 R:1:0:0:0
Centroscyllium fabricii	Species (13)	COI 12S 16S 18S 28S	COI = 15 12S = 2 16S = 1 18S = 1 28S = 1	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013621 R:1:0:0:0
Centroscyllium kamoharai	Species (14)	COI 12S 16S 18S 28S	COI = 0 12S = 0 16S = 1 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T5017749 R:1:0:0:0
Centroscyllium ornatum	Species (15)	No barcodes?	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T5017750 R:1:0:0:0
Centroscymnus coelolepis	Species (16)	COI 12S 16S 18S 28S	COI = 10 12S = 0 16S = 1 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013625 R:1:0:0:0
Centroscymnus crepidater	Species (17)	COI 12S 16S 18S 28S	COI = 32 12S = 1 16S = 1 18S = 0 28S = 0	COI = 2 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5017751 R:1:0:0:0
Centroscymnus owstonii	Species (18)	COI 12S 16S 18S 28S	COI = 14 12S = 2 16S = 1 18S = 1 28S = 1	COI = 1 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5017754 R:1:0:0:0
Centroscymnus plunketi	Species (19)	COI 12S 16S 18S 28S	COI = 11 12S = 1 16S = 1 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5017755 R:1:0:0:0
Cirrhigaleus asper	Species (20)	COI 12S 16S 18S 28S	COI = 19 12S = 0 16S = 0 18S = 0 28S = 0	COI = 1 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013647 R:1:0:0:0
Dalatias licha	Species (21)	COI 12S 16S 18S 28S	COI = 28 12S = 5 16S = 2 18S = 1 28S = 1	COI = 1 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013653 R:1:0:0:0
Deania calcea	Species (22)	COI 12S 16S 18S 28S	COI = 79 12S = 3 16S = 3 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013386 R:1:0:0:0
Deania profundorum	Species (23)	COI 12S 16S 18S 28S	COI = 34 12S = 0 16S = 8 18S = 0 28S = 0	COI = 5 12S = 0 16S = 6 18S = 0 28S = 0		accepted T5013388 R:1:0:0:0
Deania quadrispinosa	Species (24)	COI 12S 16S 18S 28S	COI = 12 12S = 0 16S = 0 18S = 0 28S = 0	COI = 2 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013389 R:1:0:0:0
Etmopterus alphus	Species (25)	COI 12S 16S 18S 28S	COI = 0 12S = 2 16S = 2 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5028013 R:1:0:0:0
Etmopterus baxteri	Species (26)	COI 12S 16S 18S 28S	COI = 6 12S = 3 16S = 3 18S = 0 28S = 0	COI = 3 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013686 R:1:0:0:0
Etmopterus bigelowi	Species (27)	COI 12S 16S 18S 28S	COI = 11 12S = 7 16S = 7 18S = 0 28S = 0	COI = 0 12S = 1 16S = 1 18S = 0 28S = 0		accepted T5013687 R:1:0:0:0
Etmopterus brachyurus	Species (28)	COI 12S 16S 18S 28S	COI = 5 12S = 7 16S = 7 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013688 R:1:0:0:0
Etmopterus brosei	Species (29)	COI 12S 16S 18S 28S	COI = 0 12S = 3 16S = 3 18S = 0 28S = 0	COI = 0 12S = 3 16S = 3 18S = 0 28S = 0		accepted T5027315 R:1:0:0:0
Etmopterus compagnoi	Species (30)	COI 12S 16S 18S 28S	COI = 0 12S = 2 16S = 2 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013689 R:1:0:0:0
Etmopterus evansi	Species (31)	COI 12S 16S 18S 28S	COI = 0 12S = 1 16S = 1 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T5019643 R:1:0:0:0
Etmopterus fusus	Species (32)	COI 12S 16S 18S 28S	COI = 1 12S = 2 16S = 2 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013692 R:1:0:0:0
Etmopterus gracilispinis	Species (33)	COI 12S 16S 18S 28S	COI = 3 12S = 2 16S = 2 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013693 R:1:0:0:0
Etmopterus granulosus	Species (34)	COI 12S 16S 18S 28S	COI = 47 12S = 3 16S = 3 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013694 R:1:0:0:0
Etmopterus lucifer	Species (35)	COI 12S 16S 18S 28S	COI = 27 12S = 9 16S = 8 18S = 0 28S = 0	COI = 7 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013695 R:1:0:0:0
Etmopterus molleri	Species (36)	COI 12S 16S 18S 28S	COI = 12 12S = 6 16S = 6 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013696 R:1:0:0:0
Etmopterus princeps	Species (37)	COI 12S 16S 18S 28S	COI = 8 12S = 3 16S = 3 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013698 R:1:0:0:0
Etmopterus pusillus	Species (38)	COI 12S 16S 18S 28S	COI = 44 12S = 9 16S = 14 18S = 0 28S = 0	COI = 3 12S = 0 16S = 5 18S = 0 28S = 0		accepted T5013700 R:1:0:0:0
Etmopterus sculptus	Species (39)	COI 12S 16S 18S 28S	COI = 0 12S = 2 16S = 2 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5028018 R:1:0:0:0
Etmopterus sentosus	Species (40)	COI 12S 16S 18S 28S	COI = 1 12S = 2 16S = 2 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013702 R:1:0:0:0
Etmopterus unicolor	Species (41)	COI 12S 16S 18S 28S	COI = 11 12S = 3 16S = 3 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013704 R:1:0:0:0
Etmopterus viator	Species (42)	COI 12S 16S 18S 28S	COI = 28 12S = 1 16S = 1 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013705 R:1:0:0:0
Euprotomicrus bispinatus	Species (43)	COI 12S 16S 18S 28S	COI = 2 12S = 0 16S = 1 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013707 R:1:0:0:0
Isistius brasiliensis	Species (44)	COI 12S 16S 18S 28S	COI = 0 12S = 1 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T5021144 R:1:0:0:0
Oxynotus bruniensis	Species (45)	COI 12S 16S 18S 28S	COI = 2 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013813 R:1:0:0:0
Scymnodalatias albicauda	Species (46)	COI 12S 16S 18S 28S	COI = 2 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5025398 R:1:0:0:0
Somniosus antarcticus	Species (47)	COI 12S 16S 18S 28S	COI = 1 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5025631 R:1:0:0:0
Somniosus microcephalus	Species (48)	COI 12S 16S 18S 28S	COI = 10 12S = 6 16S = 4 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013896 R:1:1:0:0
Squaliolus aliae	Species (49)	COI 12S 16S 18S 28S	COI = 3 12S = 4 16S = 3 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013904 R:1:0:0:0
Squaliolus laticaudus	Species (50)	COI 12S 16S 18S 28S	COI = 0 12S = 1 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T5025722 R:1:0:0:0
Squalus acanthias	Species (51)	COI 12S 16S 18S 28S	COI = 152 12S = 6 16S = 18 18S = 1 28S = 2	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013905 R:1:1:0:0
Squalus altipinnis	Species (52)	COI 12S 16S 18S 28S	COI = 2 12S = 1 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T5025724 R:1:0:0:0
Squalus blainville	Species (53)	COI 12S 16S 18S 28S	COI = 182 12S = 3 16S = 3 18S = 0 28S = 0	COI = 3 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013907 R:1:1:0:0
Squalus brevirostris	Species (54)	COI 12S 16S 18S 28S	COI = 18 12S = 3 16S = 2 18S = 0 28S = 0	COI = 1 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013908 R:1:0:0:0
Squalus chloroculus	Species (55)	COI 12S 16S 18S 28S	COI = 9 12S = 0 16S = 0 18S = 0 28S = 0	COI = 5 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013909 R:1:0:0:0
Squalus crassispinus	Species (56)	COI 12S 16S 18S 28S	COI = 8 12S = 0 16S = 0 18S = 0 28S = 0	COI = 8 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013911 R:1:0:0:0
Squalus edmundsi	Species (57)	COI 12S 16S 18S 28S	COI = 17 12S = 0 16S = 0 18S = 0 28S = 0	COI = 10 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013913 R:1:0:0:0
Squalus grahami	Species (58)	COI 12S 16S 18S 28S	COI = 9 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013915 R:1:0:0:0
Squalus hemipinnis	Species (59)	COI 12S 16S 18S 28S	COI = 20 12S = 0 16S = 0 18S = 0 28S = 0	COI = 1 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013918 R:1:0:0:0
Squalus lalannei	Species (60)	No barcodes?	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T5025725 R:1:0:0:0
Squalus megalops	Species (61)	COI 12S 16S 18S 28S	COI = 21 12S = 1 16S = 1 18S = 0 28S = 0	COI = 11 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013920 R:1:0:0:0
Squalus mitsukurii	Species (62)	COI 12S 16S 18S 28S	COI = 49 12S = 4 16S = 3 18S = 0 28S = 0	COI = 1 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013921 R:1:0:0:0
Squalus montalbani	Species (63)	COI 12S 16S 18S 28S	COI = 34 12S = 2 16S = 2 18S = 0 28S = 0	COI = 4 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013922 R:1:0:0:0
Squalus nasutus	Species (64)	COI 12S 16S 18S 28S	COI = 15 12S = 0 16S = 0 18S = 0 28S = 0	COI = 7 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013923 R:1:0:0:0
Zameus squamulosus	Species (65)	COI 12S 16S 18S 28S	COI = 12 12S = 1 16S = 1 18S = 0 28S = 0	COI = 7 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5013962 R:1:0:0:0

MZGdb Atlas [ database-version = v2023-m07-15 ]; html-date = 2023-Jul-20

Thu Jul 20 17:04:56 EDT 2023