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Caridea of the North Pacific

There are 626 species of Caridea that are commonly found in the North Pacific.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A		 All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 626 total species, 333 of these species (53%) have COI barcodes (from this or any ocean).
  • There are a total of 3685 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
    • MODE
    B    		 Regional COI barcodes for this taxa group (includes only those collected in the North Pacific region):
  • Of the 626 total species, 0 of these species (0%) have North Pacific-collected COI barcodes.
  • There are a total of 1 "North Pacific-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
    • Uncoded
    Species    		 Of the 626 total species in this region, 293 species do not have any COI barcodes (from any region).

     Barcoding progress summary for the North Pacific region, out of a total of 626 possible species:
    • There are COI barcodes for 333 species ( 53% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
      •
    • There are 12S barcodes for 176 species ( 28% coverage ), of which 1 species have barcodes sampled inside this region ( 0% coverage ). 
    • There are 16S barcodes for 269 species ( 42% coverage ), of which 3 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 18S barcodes for 162 species ( 25% coverage ), of which 2 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 28S barcodes for 76 species ( 12% coverage ), of which 1 species have barcodes sampled inside this region ( 0% coverage ).
    Change Region   [ World ] [ Arctic ] [ North Atlantic ] [ South Atlantic ] [ Southern Ocean ] [ Indian Ocean ] [ South Pacific ]
    [ North Pacific ] [ Baltic Sea ] [ Mediterranean Sea ] [ Australia subregion ]
    -----> Click here to go back to the Group Summary page. <-----


    Caridea of the North Pacific
    MZGdb DATA FILES

    Database-Version:   v2023-m07-15    		 --->   Mode-A   <---

    COI barcodes = 3685
    12S barcodes = 283
    16S barcodes = 933
    18S barcodes = 456
    28S barcodes = 165
    		 Mode-B

    COI barcodes = 1
    12S barcodes = 50
    16S barcodes = 106
    18S barcodes = 182
    28S barcodes = 16
    		 Mode-C

    COI records = 4905
    12S records = 328
    16S records = 1630
    18S records = 618
    28S records = 249
    		 Mode-D

    COI records = 720
    12S records = 52
    16S records = 269
    18S records = 197
    28S records = 16
    FASTA file MZGdb fasta (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb fasta (mode-B)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb fasta (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb fasta (mode-D)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)
    Mothur-formatted
    Taxonomic Hierarchy file

    (paired with FASTA file above)    		 MZGdb Mothur (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb Mothur (mode-B)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb Mothur (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb Mothur (mode-D)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)
    MZGdb v3.0

    "full format"

    go to
    Format Description    		CSV

    Excel-friendly full format
    comma-separated-values    		 MZGdb CSV (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb CSV (mode-B)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb CSV (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb CSV (mode-D)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)
    PSV

    pipe-separated-values    		 MZGdb PSV (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb PSV (mode-B)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb PSV (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb PSV (mode-D)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)


    MZGdb Atlas [ database-version = v2023-m07-15 ];   html-date = 2023-Jul-21









    Fri Jul 21 08:28:25 EDT 2023