MZGdb Atlas Clupeiformes (ICES western North Atlantic)

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Clupeiformes of the ICES western North Atlantic There are 20 species of Clupeiformes that are commonly found in the ICES western North Atlantic. Information on the COI barcoding* status of these species is presented in the table below.*
MODE A	*All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):* Of the 20 total species, 19 of these species (95%) have COI barcodes (from this or any ocean). There are a total of 962 "any ocean" COI barcode records available for this ocean and taxa group. All available taxa group COI barcodes will be included in the Mode A downloads.
MODE B	*Regional COI barcodes for this taxa group (includes only those collected in the* ICES western North Atlantic region): Of the 20 total species, 11 of these species (55%*) have ICES western North Atlantic-collected* COI barcodes. There are a total of 121 "ICES western North Atlantic-collected" COI barcodes available for this taxa group. In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
Uncoded Species	Of the 20 total species in this region, 1 species do not have any COI barcodes (from any region).

Barcoding progress summary for the ICES western North Atlantic region, out of a total of 20 possible species:

There are COI barcodes for 19 species ( 95% coverage ), of which 11 species have barcodes sampled inside this region ( 55% coverage ).

There are 12S barcodes for 18 species ( 90% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).

There are 16S barcodes for 18 species ( 90% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).

There are 18S barcodes for 2 species ( 10% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).

There are 28S barcodes for 0 species ( 0% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).

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Table Viewing Options [ Species-only Summary, sorted by name (default) ] or [ Full Taxonomic Hierarchy ] or [ flat-text file of sorted species names ]

Clupeiformes of the ICES western North Atlantic

Taxa Name	Taxa Level	Barcode Data?	Number of Barcodes from *any* ocean	Number of Barcodes from *this region*	Barcode Locations and Species Occurence Map	MZGdb Atlas v2023-m04-01 2023-Apr-07
Alosa aestivalis	Species (1)	COI 12S 16S 18S 28S	COI = 29 12S = 6 16S = 7 18S = 0 28S = 0	COI = 11 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5003068 R:1:1:1:0
Alosa fallax	Species (2)	COI 12S 16S 18S 28S	COI = 18 12S = 6 16S = 13 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5003071 R:1:1:1:0
Alosa mediocris	Species (3)	COI 12S 16S 18S 28S	COI = 12 12S = 3 16S = 3 18S = 0 28S = 0	COI = 6 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5003074 R:1:1:1:0
Alosa pseudoharengus	Species (4)	COI 12S 16S 18S 28S	COI = 43 12S = 10 16S = 11 18S = 0 28S = 0	COI = 26 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5003075 R:1:1:1:0
Alosa sapidissima	Species (5)	COI 12S 16S 18S 28S	COI = 47 12S = 11 16S = 17 18S = 0 28S = 0	COI = 9 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5003076 R:1:1:1:0
Anchoa choerostoma	Species (6)	COI 12S 16S 18S 28S	COI = 20 12S = 1 16S = 1 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5003092 R:1:0:0:0
Anchoa hepsetus	Species (7)	COI 12S 16S 18S 28S	COI = 14 12S = 1 16S = 1 18S = 0 28S = 0	COI = 9 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5000157 R:1:1:0:0
Anchoa lyolepis	Species (8)	COI 12S 16S 18S 28S	COI = 2 12S = 1 16S = 3 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5000158 R:1:0:0:0
Anchoa mitchilli	Species (9)	COI 12S 16S 18S 28S	COI = 26 12S = 1 16S = 3 18S = 0 28S = 0	COI = 3 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5000159 R:1:1:1:0
Anchoviella perfasciata	Species (10)	No barcodes?	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T5000162 R:1:0:0:0
Brevoortia tyrannus	Species (11)	COI 12S 16S 18S 28S	COI = 336 12S = 8 16S = 4 18S = 0 28S = 0	COI = 21 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5000314 R:1:1:0:0
Clupea harengus	Species (12)	COI 12S 16S 18S 28S	COI = 173 12S = 111 16S = 124 18S = 6 28S = 0	COI = 20 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5000424 R:1:1:1:0
Dorosoma cepedianum	Species (13)	COI 12S 16S 18S 28S	COI = 26 12S = 9 16S = 12 18S = 0 28S = 0	COI = 4 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5003813 R:1:1:1:0
Dorosoma petenense	Species (14)	COI 12S 16S 18S 28S	COI = 33 12S = 4 16S = 7 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5003815 R:1:1:1:0
Engraulis eurystole	Species (15)	COI 12S 16S 18S 28S	COI = 1 12S = 1 16S = 1 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5000544 R:1:0:0:0
Etrumeus teres	Species (16)	COI 12S 16S 18S 28S	COI = 107 12S = 5 16S = 13 18S = 1 28S = 0	COI = 5 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5000563 R:1:0:0:0
Harengula jaguana	Species (17)	COI 12S 16S 18S 28S	COI = 18 12S = 4 16S = 5 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5000635 R:1:1:0:0
Opisthonema oglinum	Species (18)	COI 12S 16S 18S 28S	COI = 69 12S = 2 16S = 3 18S = 0 28S = 0	COI = 7 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5001030 R:1:0:0:0
Sardinella aurita	Species (19)	COI 12S 16S 18S 28S	COI = 53 12S = 5 16S = 95 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5001189 R:1:1:0:0
Sardinella brasiliensis	Species (20)	COI 12S 16S 18S 28S	COI = 1 12S = 0 16S = 1 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5005325 R:1:1:0:0

MZGdb Atlas [ database-version = v2023-m04-01 ]; html-date = 2023-Apr-07

Fri Apr 7 12:49:55 EDT 2023