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Clupeiformes of the US-NE-LME

There are 18 species of Clupeiformes that are commonly found in the US-NE-LME.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A		 All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 18 total species, 17 of these species (94%) have COI barcodes (from this or any ocean).
  • There are a total of 924 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
    • MODE
    B    		 Regional COI barcodes for this taxa group (includes only those collected in the US-NE-LME region):
  • Of the 18 total species, 11 of these species (61%) have US-NE-LME-collected COI barcodes.
  • There are a total of 98 "US-NE-LME-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
    • Uncoded
    Species    		 Of the 18 total species in this region, 1 species do not have any COI barcodes (from any region).

     Barcoding progress summary for the US-NE-LME region, out of a total of 18 possible species:
    • There are COI barcodes for 17 species ( 94% coverage ), of which 11 species have barcodes sampled inside this region ( 61% coverage ).
      •
    • There are 12S barcodes for 16 species ( 88% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ). 
    • There are 16S barcodes for 17 species ( 94% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 18S barcodes for 2 species ( 11% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 28S barcodes for 0 species ( 0% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    MZGdb Data Download Options
    ---> CLICK HERE <---


    Change Region   [ ICES North Atlantic ] [ Baltic Sea ] [ Mediterranean Sea ]
          [ ICES western North Atlantic ] [ US-NE-LME ] [ CA-Scotian ] [ CA-GSL ] [ CA-Newfoundland-shelf ]
          [ ICES eastern North Atlantic ] [ Icelandic-Waters ] [ Faroe-Islands ] [ Norwegian-Sea ] [ Barents-Sea ] [ Celtic-Seas ] [ North-Sea ] [ Iberian-Shelf ]
    Table Viewing Options   [ Species-only Summary, sorted by name (default) ]   or   [ Full Taxonomic Hierarchy ]   or   [ flat-text file of sorted species names ]


    Clupeiformes of the US-NE-LME
    Taxa Name

    		Taxa
    Level    		Barcode
    Data?    		Number of
    Barcodes
    from
    any ocean    		Number of
    Barcodes
    from this region    		Barcode Locations and
    Species Occurence Map    		MZGdb Atlas
    v2023-m04-01

    2023-Apr-07
    Clupeiformes Order cummulative
    sub-totals
    ------->
    for this
    Order    		 Total Species:   18
    Sp. w/COI-Barcodes:  17

    Total COI-Barcodes:   990    		 Total Species:   18
    Sp. w/COI-Barcodes:  11

    Total COI-Barcodes:   98    		 accepted
    T5000426

    R:1:1:1:0
    ⋄   Clupeidae Family cummulative
    sub-totals
    ------->
    for this
    Family    		 Total Species:   12
    Sp. w/COI-Barcodes:  12

    Total COI-Barcodes:   840    		 Total Species:   12
    Sp. w/COI-Barcodes:  8

    Total COI-Barcodes:   81    		 accepted
    T5000425

    R:1:1:1:0
    ⋄   ⋄   Alosa Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   4
    Sp. w/COI-Barcodes:  4

    Total COI-Barcodes:   131    		 Total Species:   4
    Sp. w/COI-Barcodes:  4

    Total COI-Barcodes:   39    		 accepted
    T5000145

    R:1:1:1:0
    ⋄   ⋄   ⋄   Alosa aestivalis Species
    (1)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 29
      12S = 6
      16S = 7
      18S = 0
      28S = 0
    		   COI = 11
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5003068

    R:1:1:1:0
    ⋄   ⋄   ⋄   Alosa mediocris Species
    (2)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 12
      12S = 3
      16S = 3
      18S = 0
      28S = 0
    		   COI = 6
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5003074

    R:1:1:1:0
    ⋄   ⋄   ⋄   Alosa pseudoharengus Species
    (3)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 43
      12S = 10
      16S = 11
      18S = 0
      28S = 0
    		   COI = 19
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5003075

    R:1:1:1:0
    ⋄   ⋄   ⋄   Alosa sapidissima Species
    (4)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 47
      12S = 11
      16S = 17
      18S = 0
      28S = 0
    		   COI = 3
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5003076

    R:1:1:1:0
    ⋄   ⋄   Brevoortia Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   336    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   21    		 accepted
    T5000311

    R:1:1:0:0
    ⋄   ⋄   ⋄   Brevoortia tyrannus Species
    (5)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 336
      12S = 8
      16S = 4
      18S = 0
      28S = 0
    		   COI = 21
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5000314

    R:1:1:0:0
    ⋄   ⋄   Clupea Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   173    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   10    		 accepted
    T5001480

    R:1:1:1:0
    ⋄   ⋄   ⋄   Clupea harengus Species
    (6)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 173
      12S = 111
      16S = 124
      18S = 6
      28S = 0
    		   COI = 10
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5000424

    R:1:1:1:0
    ⋄   ⋄   Dorosoma Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   2
    Sp. w/COI-Barcodes:  2

    Total COI-Barcodes:   59    		 Total Species:   2
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   4    		 accepted
    T5002585

    R:1:1:1:0
    ⋄   ⋄   ⋄   Dorosoma cepedianum Species
    (7)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 26
      12S = 9
      16S = 12
      18S = 0
      28S = 0
    		   COI = 4
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5003813

    R:1:1:1:0
    ⋄   ⋄   ⋄   Dorosoma petenense Species
    (8)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 33
      12S = 4
      16S = 7
      18S = 0
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5003815

    R:1:1:1:0
    ⋄   ⋄   Harengula Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   18    		 Total Species:   1
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0    		 accepted
    T5000634

    R:1:1:0:0
    ⋄   ⋄   ⋄   Harengula jaguana Species
    (9)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 18
      12S = 4
      16S = 5
      18S = 0
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5000635

    R:1:1:0:0
    ⋄   ⋄   Jenkinsia Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   0
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0    		 Total Species:   0
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0    		 accepted
    T5000739

    R:1:0:0:0
    ⋄   ⋄   Opisthonema Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   69    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   7    		 accepted
    T5001029

    R:1:0:0:0
    ⋄   ⋄   ⋄   Opisthonema oglinum Species
    (10)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 69
      12S = 2
      16S = 3
      18S = 0
      28S = 0
    		   COI = 7
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5001030

    R:1:0:0:0
    ⋄   ⋄   Sardina Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   0
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0    		 Total Species:   0
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0    		 accepted
    T5002284

    R:1:1:1:0
    ⋄   ⋄   Sardinella Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   2
    Sp. w/COI-Barcodes:  2

    Total COI-Barcodes:   54    		 Total Species:   2
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0    		 accepted
    T5001188

    R:1:1:1:0
    ⋄   ⋄   ⋄   Sardinella aurita Species
    (11)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 53
      12S = 5
      16S = 95
      18S = 0
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5001189

    R:1:1:0:0
    ⋄   ⋄   ⋄   Sardinella brasiliensis Species
    (12)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 1
      12S = 0
      16S = 1
      18S = 0
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5005325

    R:1:1:0:0
    ⋄   Dussumieriidae Family cummulative
    sub-totals
    ------->
    for this
    Family    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   107    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   5    		 accepted
    T5002229

    R:1:1:1:0
    ⋄   ⋄   Etrumeus Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   107    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   5    		 accepted
    T5000562

    R:1:0:0:0
    ⋄   ⋄   ⋄   Etrumeus teres Species
    (13)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 107
      12S = 5
      16S = 13
      18S = 1
      28S = 0
    		   COI = 5
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5000563

    R:1:0:0:0
    ⋄   Engraulidae Family cummulative
    sub-totals
    ------->
    for this
    Family    		 Total Species:   5
    Sp. w/COI-Barcodes:  4

    Total COI-Barcodes:   43    		 Total Species:   5
    Sp. w/COI-Barcodes:  2

    Total COI-Barcodes:   12    		 accepted
    T5000542

    R:1:1:1:0
    ⋄   ⋄   Anchoa Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   3
    Sp. w/COI-Barcodes:  3

    Total COI-Barcodes:   42    		 Total Species:   3
    Sp. w/COI-Barcodes:  2

    Total COI-Barcodes:   12    		 accepted
    T5000156

    R:1:1:1:0
    ⋄   ⋄   ⋄   Anchoa hepsetus Species
    (14)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 14
      12S = 1
      16S = 1
      18S = 0
      28S = 0
    		   COI = 9
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5000157

    R:1:1:0:0
    ⋄   ⋄   ⋄   Anchoa lyolepis Species
    (15)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 2
      12S = 1
      16S = 3
      18S = 0
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5000158

    R:1:0:0:0
    ⋄   ⋄   ⋄   Anchoa mitchilli Species
    (16)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 26
      12S = 1
      16S = 3
      18S = 0
      28S = 0
    		   COI = 3
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5000159

    R:1:1:1:0
    ⋄   ⋄   Anchoviella Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   1
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0    		 Total Species:   1
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0    		 accepted
    T5000161

    R:1:1:1:0
    ⋄   ⋄   ⋄   Anchoviella perfasciata Species
    (17)    		 No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 no map accepted
    T5000162

    R:1:0:0:0
    ⋄   ⋄   Engraulis Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   1    		 Total Species:   1
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0    		 accepted
    T5000543

    R:1:1:0:0
    ⋄   ⋄   ⋄   Engraulis eurystole Species
    (18)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 1
      12S = 1
      16S = 1
      18S = 0
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5000544

    R:1:0:0:0
    MZGdb Atlas [ database-version = v2023-m04-01 ];   html-date = 2023-Apr-07









    Fri Apr 7 12:51:07 EDT 2023