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Decapoda of the ICES eastern North Atlantic

There are 309 species of Decapoda that are commonly found in the ICES eastern North Atlantic.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A		 All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 309 total species, 246 of these species (79%) have COI barcodes (from this or any ocean).
  • There are a total of 8752 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
    • MODE
    B    		 Regional COI barcodes for this taxa group (includes only those collected in the ICES eastern North Atlantic region):
  • Of the 309 total species, 151 of these species (48%) have ICES eastern North Atlantic-collected COI barcodes.
  • There are a total of 1404 "ICES eastern North Atlantic-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
    • Uncoded
    Species    		 Of the 309 total species in this region, 63 species do not have any COI barcodes (from any region).

     Barcoding progress summary for the ICES eastern North Atlantic region, out of a total of 309 possible species:
    • There are COI barcodes for 246 species ( 79% coverage ), of which 151 species have barcodes sampled inside this region ( 48% coverage ).
      •
    • There are 12S barcodes for 91 species ( 29% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ). 
    • There are 16S barcodes for 171 species ( 55% coverage ), of which 1 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 18S barcodes for 111 species ( 35% coverage ), of which 1 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 28S barcodes for 69 species ( 22% coverage ), of which 1 species have barcodes sampled inside this region ( 0% coverage ).
    Change Region   [ ICES North Atlantic ] [ Baltic Sea ] [ Mediterranean Sea ]
          [ ICES western North Atlantic ] [ US-NE-LME ] [ CA-Scotian ] [ CA-GSL ] [ CA-Newfoundland-shelf ]
          [ ICES eastern North Atlantic ] [ Icelandic-Waters ] [ Faroe-Islands ] [ Norwegian-Sea ] [ Barents-Sea ] [ Celtic-Seas ] [ North-Sea ] [ Iberian-Shelf ]
    -----> Click here to go back to the Group Summary page. <-----


    Decapoda of the ICES eastern North Atlantic
    MZGdb DATA FILES

    Database-Version:   v2023-m04-01    		 --->   Mode-A   <---

    COI barcodes = 8752
    12S barcodes = 182
    16S barcodes = 1217
    18S barcodes = 276
    28S barcodes = 188
    		 Mode-B

    COI barcodes = 1404
    12S barcodes = 0
    16S barcodes = 149
    18S barcodes = 5
    28S barcodes = 7
    		 Mode-C

    COI records = 11097
    12S records = 260
    16S records = 1928
    18S records = 382
    28S records = 260
    		 Mode-D

    COI records = 1529
    12S records = 0
    16S records = 157
    18S records = 5
    28S records = 12
    FASTA file MZGdb fasta (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb fasta (mode-B)
    COI | n/d | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb fasta (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb fasta (mode-D)
    COI | n/d | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)
    Mothur-formatted
    Taxonomic Hierarchy file

    (paired with FASTA file above)    		 MZGdb Mothur (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb Mothur (mode-B)
    COI | n/d | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb Mothur (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb Mothur (mode-D)
    COI | n/d | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)
    MZGdb v3.0

    "full format"

    go to
    Format Description    		CSV

    Excel-friendly full format
    comma-separated-values    		 MZGdb CSV (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb CSV (mode-B)
    COI | n/d | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb CSV (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb CSV (mode-D)
    COI | n/d | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)
    PSV

    pipe-separated-values    		 MZGdb PSV (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb PSV (mode-B)
    COI | n/d | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb PSV (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb PSV (mode-D)
    COI | n/d | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)


    MZGdb Atlas [ database-version = v2023-m04-01 ];   html-date = 2023-Apr-12









    Wed Apr 12 16:45:11 EDT 2023