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Dendrobranchiata of the Indian Ocean

There are 231 species of Dendrobranchiata that are commonly found in the Indian Ocean.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A		 All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 231 total species, 104 of these species (45%) have COI barcodes (from this or any ocean).
  • There are a total of 3138 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
    • MODE
    B    		 Regional COI barcodes for this taxa group (includes only those collected in the Indian Ocean region):
  • Of the 231 total species, 0 of these species (0%) have Indian Ocean-collected COI barcodes.
  • There are a total of 1 "Indian Ocean-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
    • Uncoded
    Species    		 Of the 231 total species in this region, 127 species do not have any COI barcodes (from any region).

     Barcoding progress summary for the Indian Ocean region, out of a total of 231 possible species:
    • There are COI barcodes for 104 species ( 45% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
      •
    • There are 12S barcodes for 42 species ( 18% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ). 
    • There are 16S barcodes for 72 species ( 31% coverage ), of which 2 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 18S barcodes for 14 species ( 6% coverage ), of which 2 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 28S barcodes for 15 species ( 6% coverage ), of which 2 species have barcodes sampled inside this region ( 0% coverage ).
    Change Region   [ World ] [ Arctic ] [ North Atlantic ] [ South Atlantic ] [ Southern Ocean ] [ Indian Ocean ] [ South Pacific ]
    [ North Pacific ] [ Baltic Sea ] [ Mediterranean Sea ] [ Australia subregion ]
    -----> Click here to go back to the Group Summary page. <-----


    Dendrobranchiata of the Indian Ocean
    MZGdb DATA FILES

    Database-Version:   v2023-m07-15    		 --->   Mode-A   <---

    COI barcodes = 3138
    12S barcodes = 274
    16S barcodes = 911
    18S barcodes = 28
    28S barcodes = 92
    		 Mode-B

    COI barcodes = 1
    12S barcodes = 0
    16S barcodes = 111
    18S barcodes = 2
    28S barcodes = 6
    		 Mode-C

    COI records = 3287
    12S records = 289
    16S records = 943
    18S records = 31
    28S records = 96
    		 Mode-D

    COI records = 392
    12S records = 1
    16S records = 112
    18S records = 2
    28S records = 6
    FASTA file MZGdb fasta (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb fasta (mode-B)
    COI | n/d | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb fasta (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb fasta (mode-D)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)
    Mothur-formatted
    Taxonomic Hierarchy file

    (paired with FASTA file above)    		 MZGdb Mothur (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb Mothur (mode-B)
    COI | n/d | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb Mothur (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb Mothur (mode-D)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)
    MZGdb v3.0

    "full format"

    go to
    Format Description    		CSV

    Excel-friendly full format
    comma-separated-values    		 MZGdb CSV (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb CSV (mode-B)
    COI | n/d | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb CSV (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb CSV (mode-D)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)
    PSV

    pipe-separated-values    		 MZGdb PSV (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb PSV (mode-B)
    COI | n/d | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb PSV (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb PSV (mode-D)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)


    MZGdb Atlas [ database-version = v2023-m07-15 ];   html-date = 2023-Jul-21









    Fri Jul 21 07:45:23 EDT 2023