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Paracalanidae of the US-NE-LME

There are 9 species of Paracalanidae that are commonly found in the US-NE-LME.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A		 All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 9 total species, 9 of these species (100%) have COI barcodes (from this or any ocean).
  • There are a total of 396 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
    • MODE
    B    		 Regional COI barcodes for this taxa group (includes only those collected in the US-NE-LME region):
  • Of the 9 total species, 5 of these species (55%) have US-NE-LME-collected COI barcodes.
  • There are a total of 9 "US-NE-LME-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
    • Uncoded
    Species    		 Of the 9 total species in this region, 0 species do not have any COI barcodes (from any region).

     Barcoding progress summary for the US-NE-LME region, out of a total of 9 possible species:
    • There are COI barcodes for 9 species ( 100% coverage ), of which 5 species have barcodes sampled inside this region ( 55% coverage ).
      •
    • There are 12S barcodes for 0 species ( 0% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ). 
    • There are 16S barcodes for 2 species ( 22% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 18S barcodes for 9 species ( 100% coverage ), of which 1 species have barcodes sampled inside this region ( 11% coverage ).
    • There are 28S barcodes for 7 species ( 77% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    MZGdb Data Download Options
    ---> CLICK HERE <---


    Change Region   [ ICES North Atlantic & inland Seas ] [ ICES open-ocean Only ] [ Baltic Sea ] [ Mediterranean Sea ]
    [ ICES open-ocean WEST ] [ US-NE-LME ] [ CA-Scotian ] [ CA-Newfoundland-shelf ]
    [ ICES open-ocean EAST ] [ Norwegian-Sea ] [ North-Sea ] [ Ireland ] [ Iberian-Shelf ]
    Table Viewing Options   [ Species-only Summary, sorted by name (default) ]   or   [ Full Taxonomic Hierarchy ]   or   [ flat-text file of sorted species names ]

    Quality Control:   Corrected synonyms exist for this taxa.   [ Show me a list of the corrected names ]

    Paracalanidae of the US-NE-LME
    Taxa Name

    		Taxa
    Level    		Barcode
    Data?    		Number of
    Barcodes
    from
    any ocean    		Number of
    Barcodes
    from this region    		Barcode Locations and
    Species Occurence Map    		MZGdb Atlas
    v2023-m01-12

    2023-Jan-14
      Calocalanus pavo Species
    (1)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 4
      12S = 0
      16S = 0
      18S = 3
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T4000042

    R:1:0:0:0
      Calocalanus styliremis Species
    (2)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 2
      12S = 0
      16S = 1
      18S = 1
      28S = 1
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T4000134

    R:1:0:0:0
      Calocalanus tenuis Species
    (3)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 2
      12S = 0
      16S = 0
      18S = 2
      28S = 1
    		   COI = 2
      12S = 0
      16S = 0
      18S = 1
      28S = 0
    		 accepted
    T4001724

    R:1:0:0:0
      Mecynocera clausi Species
    (4)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 6
      12S = 0
      16S = 0
      18S = 6
      28S = 10
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T4000045

    R:1:0:0:0
      Paracalanus aculeatus
    alternate_representation
    		 Species
    (5)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 33
      12S = 0
      16S = 0
      18S = 5
      28S = 3
    		   COI = 1
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 alternate_representation
    T4000041

    R:1:0:0:0
      Paracalanus parvus
    alternate_representation
    		 Species
    (6)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 166
      12S = 0
      16S = 2
      18S = 23
      28S = 11
    		   COI = 1
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 alternate_representation
    T4000031

    R:1:1:0:0
      Paracalanus quasimodo Species
    (7)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 132
      12S = 0
      16S = 0
      18S = 1
      28S = 0
    		   COI = 4
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T4003366

    R:1:0:0:0
      Paracalanus tropicus Species
    (8)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 32
      12S = 0
      16S = 0
      18S = 1
      28S = 10
    		   COI = 1
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T4000740

    R:1:0:0:0
      Parvocalanus crassirostris Species
    (9)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 24
      12S = 0
      16S = 0
      18S = 4
      28S = 1
    		   COI = 0
      12S = 0
      16S = 0
      18S = 1
      28S = 0
    		 accepted
    T4003754

    R:1:0:0:0
    MZGdb Atlas [ database-version = v2023-m01-12 ];   html-date = 2023-Jan-14









    Sat Jan 14 22:17:53 EST 2023