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Cyclopoida
of the
US-NE-LME
There are
17
species of
Cyclopoida
that are commonly found in the
US-NE-LME
.
Information on the
COI barcoding
status of these species is presented in the table below.
MODE
A
All available COI barcodes for this taxa group (
collected from
any
ocean or without geo-referencing
):
Of the 17 total species, only
8
species (
47%
) have COI barcodes (from this or any ocean).
There are a total of
303
"
any ocean
" COI barcode records available for this ocean and taxa group.
All available taxa group COI barcodes will be included in the
Mode A
downloads.
MODE
B
Regional COI barcodes for this taxa group (
includes
only
those collected in the
US-NE-LME region):
Of the 17 total species, only
1
species (
5%
) have
US-NE-LME-collected
COI barcodes.
There are a total of
1
"
US-NE-LME-collected
" COI barcodes available for this taxa group.
In the map to the right,
Red Stars
show sampling locations of the COI barcodes in the
Mode B
download.
Uncoded
Species
Of the 17 total species in this region,
9
species do not have any
COI
barcodes
(from any region).
Barcoding progress summary for the
US-NE-LME
region, out of a total of
17
possible species:
There are
COI
barcodes for 8 species ( 47% coverage ). Only 1 species have barcodes sampled inside this region ( 5% coverage ).
There are
12S
barcodes for 2 species ( 11% coverage ). Only 0 species have barcodes sampled inside this region ( 0% ).
There are
16S
barcodes for 0 species ( 0% coverage ). Only 0 species have barcodes sampled inside this region ( 0% ).
There are
18S
barcodes for 10 species ( 58% coverage ). Only 0 species have barcodes sampled inside this region ( 0% ).
There are
28S
barcodes for 8 species ( 47% coverage ). Only 1 species have barcodes sampled inside this region ( 5% ).
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Table Viewing Options
[
Species-only Summary, sorted by name
(default) ]
or
[
Full Taxonomic Hierarchy
]
or
[
flat-text file of sorted species names
]
Cyclopoida
of the
US-NE-LME
Taxa Name
Taxa
Level
Barcode
Data?
Number of
Barcodes
from
any
ocean
Number of
Barcodes
from
this region
Barcode Locations and
Species Occurence Map
MZGdb Atlas
v2.01
2022-Mar-10
Chondracanthus cottunculi
Species
(1)
No barcodes?
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4018254
R:1:0:0:0
Chondracanthus merluccii
Species
(2)
COI
12S
16S
18S
28S
COI = 6
12S = 0
16S = 0
18S = 1
28S = 2
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4015973
R:1:0:0:0
Copilia mirabilis
Species
(3)
COI
12S
16S
18S
28S
COI = 10
12S = 0
16S = 0
18S = 2
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000276
R:1:0:0:0
Corycaeus speciosus
Species
(4)
COI
12S
16S
18S
28S
COI = 2
12S = 0
16S = 0
18S = 2
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4095976
R:1:1:0:0
Ergasilus labracis
Species
(5)
No barcodes?
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4018655
R:1:1:0:0
Farranula gracilis
Species
(6)
No barcodes?
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000215
R:1:0:0:0
Heliogabalus phascolia
Species
(7)
No barcodes?
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4020753
R:1:0:0:0
Oithona atlantica
Species
(8)
COI
12S
16S
18S
28S
COI = 9
12S = 0
16S = 0
18S = 3
28S = 6
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000136
R:1:1:1:0
Oithona colcarva
Species
(9)
No barcodes?
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4019508
R:1:1:1:0
Oithona plumifera
Species
(10)
COI
12S
16S
18S
28S
COI = 0
12S = 0
16S = 0
18S = 2
28S = 4
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000157
R:1:1:1:0
Oithona setigera
alternate_representation
Species
(11)
COI
12S
16S
18S
28S
COI = 0
12S = 0
16S = 0
18S = 1
28S = 1
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
alternate_representation
T4000209
R:1:0:0:0
Oithona setigera setigera
* All data are included in
the Species level above.
Subspecies
COI
12S
16S
18S
28S
COI = 0
12S = 0
16S = 0
18S = 1
28S = 1
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4098612
R:1:0:0:0
Oithona similis
Species
(12)
COI
12S
16S
18S
28S
COI = 260
12S = 0
16S = 0
18S = 10
28S = 106
COI = 1
12S = 0
16S = 0
18S = 0
28S = 2
accepted
T4000030
R:1:1:1:0
Oncaea venusta
Species
(13)
COI
12S
16S
18S
28S
COI = 0
12S = 0
16S = 0
18S = 9
28S = 6
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000207
R:1:0:0:0
Sapphirina nigromaculata
Species
(14)
No barcodes?
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000422
R:1:0:0:0
Triconia borealis
Species
(15)
COI
12S
16S
18S
28S
COI = 8
12S = 0
16S = 0
18S = 2
28S = 3
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4003630
R:1:0:0:0
Triconia conifera
Species
(16)
COI
12S
16S
18S
28S
COI = 16
12S = 2
16S = 0
18S = 1
28S = 1
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4003631
R:1:0:0:0
Triconia minuta
Species
(17)
COI
12S
16S
18S
28S
COI = 3
12S = 2
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4003690
R:1:0:0:0
MZGdb Atlas v2.01
2022-Mar-10
Thu Mar 10 12:27:41 EST 2022