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Cyclopoida of the US-NE-LME

There are 17 species of Cyclopoida that are commonly found in the US-NE-LME.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A
All available COI barcodes for this taxa group (collected from any ocean or without geo-referencing):
  • Of the 17 total species, only 8 species (47%) have COI barcodes (from this or any ocean).
  • There are a total of 303 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
  • MODE
    B
    Regional COI barcodes for this taxa group (includes only those collected in the US-NE-LME region):
  • Of the 17 total species, only 1 species (5%) have US-NE-LME-collected COI barcodes.
  • There are a total of 1 "US-NE-LME-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
  • Uncoded
    Species
    Of the 17 total species in this region, 9 species do not have any COI barcodes (from any region).

    Barcoding progress summary for the US-NE-LME region, out of a total of 17 possible species:
    • There are COI barcodes for 8 species ( 47% coverage ). Only 1 species have barcodes sampled inside this region ( 5% coverage ).
    • There are 12S barcodes for 2 species ( 11% coverage ). Only 0 species have barcodes sampled inside this region ( 0% ). 
    • There are 16S barcodes for 0 species ( 0% coverage ). Only 0 species have barcodes sampled inside this region ( 0% ).
    • There are 18S barcodes for 10 species ( 58% coverage ). Only 0 species have barcodes sampled inside this region ( 0% ).
    • There are 28S barcodes for 8 species ( 47% coverage ). Only 1 species have barcodes sampled inside this region ( 5% ).


    click on map above to see a larger version


    MZGdb Data Download Options
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    Change Region   [ ICES North Atlantic & inland Seas ] [ ICES open-ocean Only ] [ Baltic Sea ] [ Mediterranean Sea ]
    [ ICES open-ocean WEST ] [ US-NE-LME ] [ CA-Scotian ] [ CA-Newfoundland-shelf ]
    [ ICES open-ocean EAST ] [ Norwegian-Sea ] [ North-Sea ] [ Ireland ] [ Iberian-Shelf ]

    Table Viewing Options   [ Species-only Summary, sorted by name (default) ]   or   [ Full Taxonomic Hierarchy ]   or   [ flat-text file of sorted species names ]


    Cyclopoida of the US-NE-LME
    Taxa Name

    Taxa
    Level
    Barcode
    Data?
    Number of
    Barcodes
    from
    any ocean
    Number of
    Barcodes
    from this region
    Barcode Locations and
    Species Occurence Map
    MZGdb Atlas
    v2.01


    2022-Mar-10
      Chondracanthus cottunculi Species
    (1)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4018254


    R:1:0:0:0
      Chondracanthus merluccii Species
    (2)
    COI
    12S
    16S
    18S
    28S
      COI = 6
      12S = 0
      16S = 0
      18S = 1
      28S = 2
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4015973


    R:1:0:0:0
      Copilia mirabilis Species
    (3)
    COI
    12S
    16S
    18S
    28S
      COI = 10
      12S = 0
      16S = 0
      18S = 2
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000276


    R:1:0:0:0
      Corycaeus speciosus Species
    (4)
    COI
    12S
    16S
    18S
    28S
      COI = 2
      12S = 0
      16S = 0
      18S = 2
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4095976


    R:1:1:0:0
      Ergasilus labracis Species
    (5)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4018655


    R:1:1:0:0
      Farranula gracilis Species
    (6)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000215


    R:1:0:0:0
      Heliogabalus phascolia Species
    (7)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4020753


    R:1:0:0:0
      Oithona atlantica Species
    (8)
    COI
    12S
    16S
    18S
    28S
      COI = 9
      12S = 0
      16S = 0
      18S = 3
      28S = 6
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000136


    R:1:1:1:0
      Oithona colcarva Species
    (9)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4019508


    R:1:1:1:0
      Oithona plumifera Species
    (10)
    COI
    12S
    16S
    18S
    28S
      COI = 0
      12S = 0
      16S = 0
      18S = 2
      28S = 4
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000157


    R:1:1:1:0
      Oithona setigera
    alternate_representation
    Species
    (11)
    COI
    12S
    16S
    18S
    28S
      COI = 0
      12S = 0
      16S = 0
      18S = 1
      28S = 1
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    alternate_representation
    T4000209


    R:1:0:0:0
      Oithona setigera setigera
    * All data are included in
    the Species level above.
    Subspecies
    COI
    12S
    16S
    18S
    28S
      COI = 0
      12S = 0
      16S = 0
      18S = 1
      28S = 1
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4098612


    R:1:0:0:0
      Oithona similis Species
    (12)
    COI
    12S
    16S
    18S
    28S
      COI = 260
      12S = 0
      16S = 0
      18S = 10
      28S = 106
      COI = 1
      12S = 0
      16S = 0
      18S = 0
      28S = 2
    accepted
    T4000030


    R:1:1:1:0
      Oncaea venusta Species
    (13)
    COI
    12S
    16S
    18S
    28S
      COI = 0
      12S = 0
      16S = 0
      18S = 9
      28S = 6
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000207


    R:1:0:0:0
      Sapphirina nigromaculata Species
    (14)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000422


    R:1:0:0:0
      Triconia borealis Species
    (15)
    COI
    12S
    16S
    18S
    28S
      COI = 8
      12S = 0
      16S = 0
      18S = 2
      28S = 3
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4003630


    R:1:0:0:0
      Triconia conifera Species
    (16)
    COI
    12S
    16S
    18S
    28S
      COI = 16
      12S = 2
      16S = 0
      18S = 1
      28S = 1
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4003631


    R:1:0:0:0
      Triconia minuta Species
    (17)
    COI
    12S
    16S
    18S
    28S
      COI = 3
      12S = 2
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4003690


    R:1:0:0:0
    MZGdb Atlas v2.01   2022-Mar-10









    Thu Mar 10 12:27:41 EST 2022