MZGdb Atlas Cyclopoida (US-NE-LME)

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Cyclopoida of the US-NE-LME There are 17 species of Cyclopoida that are commonly found in the US-NE-LME. Information on the COI barcoding* status of these species is presented in the table below.*
MODE A	*All available COI barcodes for this taxa group (collected from any ocean or without geo-referencing):* Of the 17 total species, only 8 species (47%) have COI barcodes (from this or any ocean). There are a total of 303 "any ocean" COI barcode records available for this ocean and taxa group. All available taxa group COI barcodes will be included in the Mode A downloads.
MODE B	*Regional COI barcodes for this taxa group (includes only those collected in the* US-NE-LME region):** Of the 17 total species, only 1 species (5%) have US-NE-LME-collected COI barcodes. There are a total of 1 "US-NE-LME-collected" COI barcodes available for this taxa group. In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
Uncoded Species	Of the 17 total species in this region, 9 species do not have any COI barcodes (from any region).

Barcoding progress summary for the US-NE-LME region, out of a total of 17 possible species:

There are COI barcodes for 8 species ( 47% coverage ). Only 1 species have barcodes sampled inside this region ( 5% coverage ).

There are 12S barcodes for 2 species ( 11% coverage ). Only 0 species have barcodes sampled inside this region ( 0% ).

There are 16S barcodes for 0 species ( 0% coverage ). Only 0 species have barcodes sampled inside this region ( 0% ).

There are 18S barcodes for 10 species ( 58% coverage ). Only 0 species have barcodes sampled inside this region ( 0% ).

There are 28S barcodes for 8 species ( 47% coverage ). Only 1 species have barcodes sampled inside this region ( 5% ).

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Change Region [ ICES North Atlantic & inland Seas ] [ ICES open-ocean Only ] [ Baltic Sea ] [ Mediterranean Sea ]
[ ICES open-ocean WEST ] [ US-NE-LME ] [ CA-Scotian ] [ CA-Newfoundland-shelf ]
[ ICES open-ocean EAST ] [ Norwegian-Sea ] [ North-Sea ] [ Ireland ] [ Iberian-Shelf ]
Table Viewing Options [ Species-only Summary, sorted by name (default) ] or [ Full Taxonomic Hierarchy ] or [ flat-text file of sorted species names ]

Cyclopoida of the US-NE-LME

Taxa Name

Taxa
Level Barcode
Data? Number of
Barcodes
from
any ocean Number of
Barcodes
from this region Barcode Locations and
Species Occurence Map MZGdb Atlas
v2.01

2022-Mar-10

Chondracanthus cottunculi Species
(1) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4018254

R:1:0:0:0

Chondracanthus merluccii Species
(2) COI
12S
16S
18S
28S
COI = 6
12S = 0
16S = 0
18S = 1
28S = 2
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4015973

R:1:0:0:0

Copilia mirabilis Species
(3) COI
12S
16S
18S
28S
COI = 10
12S = 0
16S = 0
18S = 2
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000276

R:1:0:0:0

Corycaeus speciosus Species
(4) COI
12S
16S
18S
28S
COI = 2
12S = 0
16S = 0
18S = 2
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4095976

R:1:1:0:0

Ergasilus labracis Species
(5) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4018655

R:1:1:0:0

Farranula gracilis Species
(6) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000215

R:1:0:0:0

Heliogabalus phascolia Species
(7) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4020753

R:1:0:0:0

Oithona atlantica Species
(8) COI
12S
16S
18S
28S
COI = 9
12S = 0
16S = 0
18S = 3
28S = 6
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000136

R:1:1:1:0

Oithona colcarva Species
(9) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4019508

R:1:1:1:0

Oithona plumifera Species
(10) COI
12S
16S
18S
28S
COI = 0
12S = 0
16S = 0
18S = 2
28S = 4
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000157

R:1:1:1:0

Oithona setigera
alternate_representation
Species
(11) COI
12S
16S
18S
28S
COI = 0
12S = 0
16S = 0
18S = 1
28S = 1
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
alternate_representation
T4000209

R:1:0:0:0

Oithona setigera setigera
* All data are included in
the Species level above.
Subspecies
COI
12S
16S
18S
28S
COI = 0
12S = 0
16S = 0
18S = 1
28S = 1
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4098612

R:1:0:0:0

Oithona similis Species
(12) COI
12S
16S
18S
28S
COI = 260
12S = 0
16S = 0
18S = 10
28S = 106
COI = 1
12S = 0
16S = 0
18S = 0
28S = 2
accepted
T4000030

R:1:1:1:0

Oncaea venusta Species
(13) COI
12S
16S
18S
28S
COI = 0
12S = 0
16S = 0
18S = 9
28S = 6
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000207

R:1:0:0:0

Sapphirina nigromaculata Species
(14) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000422

R:1:0:0:0

Triconia borealis Species
(15) COI
12S
16S
18S
28S
COI = 8
12S = 0
16S = 0
18S = 2
28S = 3
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4003630

R:1:0:0:0

Triconia conifera Species
(16) COI
12S
16S
18S
28S
COI = 16
12S = 2
16S = 0
18S = 1
28S = 1
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4003631

R:1:0:0:0

Triconia minuta Species
(17) COI
12S
16S
18S
28S
COI = 3
12S = 2
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4003690

R:1:0:0:0

MZGdb Atlas v2.01 2022-Mar-10

Thu Mar 10 12:27:41 EST 2022