MZGdb Atlas Cyclopoida (ICES Open-ocean WEST)

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Cyclopoida of the ICES Open-ocean WEST There are 40 species of Cyclopoida that are commonly found in the ICES Open-ocean WEST. Information on the COI barcoding* status of these species is presented in the table below.*
MODE A	*All available COI barcodes for this taxa group (collected from any ocean or without geo-referencing):* Of the 40 total species, only 12 species (30%) have COI barcodes (from this or any ocean). There are a total of 319 "any ocean" COI barcode records available for this ocean and taxa group. All available taxa group COI barcodes will be included in the Mode A downloads.
MODE B	*Regional COI barcodes for this taxa group (includes only those collected in the* ICES Open-ocean WEST region):** Of the 40 total species, only 1 species (2%) have ICES Open-ocean WEST-collected COI barcodes. There are a total of 1 "ICES Open-ocean WEST-collected" COI barcodes available for this taxa group. In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
Uncoded Species	Of the 40 total species in this region, 28 species do not have any COI barcodes (from any region).

Barcoding progress summary for the ICES Open-ocean WEST region, out of a total of 40 possible species:

There are COI barcodes for 12 species ( 30% coverage ). Only 1 species have barcodes sampled inside this region ( 2% coverage ).

There are 12S barcodes for 3 species ( 7% coverage ). Only 0 species have barcodes sampled inside this region ( 0% ).

There are 16S barcodes for 1 species ( 2% coverage ). Only 0 species have barcodes sampled inside this region ( 0% ).

There are 18S barcodes for 15 species ( 37% coverage ). Only 0 species have barcodes sampled inside this region ( 0% ).

There are 28S barcodes for 12 species ( 30% coverage ). Only 1 species have barcodes sampled inside this region ( 2% ).

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Change Region [ ICES North Atlantic & inland Seas ] [ ICES open-ocean Only ] [ Baltic Sea ] [ Mediterranean Sea ]
[ ICES open-ocean WEST ] [ US-NE-LME ] [ CA-Scotian ] [ CA-Newfoundland-shelf ]
[ ICES open-ocean EAST ] [ Norwegian-Sea ] [ North-Sea ] [ Ireland ] [ Iberian-Shelf ]
Table Viewing Options [ Species-only Summary, sorted by name (default) ] or [ Full Taxonomic Hierarchy ] or [ flat-text file of sorted species names ]

Cyclopoida of the ICES Open-ocean WEST

Taxa Name

Taxa
Level Barcode
Data? Number of
Barcodes
from
any ocean Number of
Barcodes
from this region Barcode Locations and
Species Occurence Map MZGdb Atlas
v2.01

2022-Mar-10

Agetus typicus Species
(1) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4004397

R:1:0:0:0

Chondracanthodes deflexus Species
(2) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4018249

R:1:0:0:0

Chondracanthodes radiatus Species
(3) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4018250

R:1:0:0:0

Chondracanthus cottunculi Species
(4) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4018254

R:1:0:0:0

Chondracanthus merluccii Species
(5) COI
12S
16S
18S
28S
COI = 6
12S = 0
16S = 0
18S = 1
28S = 2
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4015973

R:1:0:0:0

Conaea rapax Species
(6) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000413

R:1:0:0:0

Copilia mediterranea Species
(7) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000683

R:1:0:0:0

Copilia mirabilis Species
(8) COI
12S
16S
18S
28S
COI = 10
12S = 0
16S = 0
18S = 2
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000276

R:1:0:0:0

Copilia quadrata Species
(9) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000382

R:1:0:0:0

Corycaeus speciosus Species
(10) COI
12S
16S
18S
28S
COI = 2
12S = 0
16S = 0
18S = 2
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4095976

R:1:1:0:0

Doropygopsis longicauda Species
(11) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4018566

R:1:0:0:0

Ergasilus labracis Species
(12) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4018655

R:1:1:0:0

Farranula gracilis Species
(13) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000215

R:1:0:0:0

Heliogabalus phascolia Species
(14) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4020753

R:1:0:0:0

Lubbockia squillimana Species
(15) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000228

R:1:0:0:0

Macrochiron avirostrum Species
(16) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4019239

R:1:0:0:0

Macrochiron hudsoni Species
(17) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4019241

R:1:0:0:0

Oithona atlantica Species
(18) COI
12S
16S
18S
28S
COI = 9
12S = 0
16S = 0
18S = 3
28S = 6
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000136

R:1:1:1:0

Oithona colcarva Species
(19) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4019508

R:1:1:1:0

Oithona hamata Species
(20) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000780

R:1:1:1:0

Oithona linearis Species
(21) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000560

R:1:1:1:0

Oithona nana Species
(22) COI
12S
16S
18S
28S
COI = 10
12S = 0
16S = 0
18S = 3
28S = 14
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000247

R:1:1:1:0

Oithona plumifera Species
(23) COI
12S
16S
18S
28S
COI = 0
12S = 0
16S = 0
18S = 2
28S = 4
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000157

R:1:1:1:0

Oithona setigera
alternate_representation
Species
(24) COI
12S
16S
18S
28S
COI = 0
12S = 0
16S = 0
18S = 1
28S = 1
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
alternate_representation
T4000209

R:1:0:0:0

Oithona setigera setigera
* All data are included in
the Species level above.
Subspecies
COI
12S
16S
18S
28S
COI = 0
12S = 0
16S = 0
18S = 1
28S = 1
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4098612

R:1:0:0:0

Oithona similis Species
(25) COI
12S
16S
18S
28S
COI = 260
12S = 0
16S = 0
18S = 10
28S = 106
COI = 1
12S = 0
16S = 0
18S = 0
28S = 2
accepted
T4000030

R:1:1:1:0

Oithona tenuis Species
(26) COI
12S
16S
18S
28S
COI = 0
12S = 0
16S = 0
18S = 1
28S = 1
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000458

R:1:1:1:0

Oncaea media Species
(27) COI
12S
16S
18S
28S
COI = 3
12S = 0
16S = 0
18S = 4
28S = 4
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000162

R:1:0:0:0

Oncaea mediterranea
alternate_representation
Species
(28) COI
12S
16S
18S
28S
COI = 2
12S = 0
16S = 1
18S = 3
28S = 4
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
alternate_representation
T4000187

R:1:0:0:0

Oncaea ornata Species
(29) COI
12S
16S
18S
28S
COI = 0
12S = 3
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000429

R:1:0:0:0

Oncaea parila Species
(30) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4001285

R:1:0:0:0

Oncaea venusta Species
(31) COI
12S
16S
18S
28S
COI = 0
12S = 0
16S = 0
18S = 9
28S = 6
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000207

R:1:0:0:0

Onychocorycaeus giesbrechti Species
(32) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4004172

R:1:0:0:0

Pachos punctatum Species
(33) COI
12S
16S
18S
28S
COI = 1
12S = 0
16S = 0
18S = 1
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000509

R:1:0:0:0

Pseudomacrochiron parvum Species
(34) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4019989

R:1:0:0:0

Sapphirina maculosa Species
(35) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000948

R:1:0:0:0

Sapphirina nigromaculata Species
(36) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000422

R:1:0:0:0

Sapphirina sali Species
(37) No barcodes? COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4020086

R:1:0:0:0

Triconia borealis Species
(38) COI
12S
16S
18S
28S
COI = 8
12S = 0
16S = 0
18S = 2
28S = 3
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4003630

R:1:0:0:0

Triconia conifera Species
(39) COI
12S
16S
18S
28S
COI = 16
12S = 2
16S = 0
18S = 1
28S = 1
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4003631

R:1:0:0:0

Triconia minuta Species
(40) COI
12S
16S
18S
28S
COI = 3
12S = 2
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4003690

R:1:0:0:0

MZGdb Atlas v2.01 2022-Mar-10

Thu Mar 10 12:20:22 EST 2022