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Calanidae of the US-NE-LME

There are 11 species of Calanidae that are commonly found in the US-NE-LME.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A
All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 11 total species, 11 of these species (100%) have COI barcodes (from this or any ocean).
  • There are a total of 1374 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
  • MODE
    B
    Regional COI barcodes for this taxa group (includes only those collected in the US-NE-LME region):
  • Of the 11 total species, 3 of these species (27%) have US-NE-LME-collected COI barcodes.
  • There are a total of 12 "US-NE-LME-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
  • Uncoded
    Species
    Of the 11 total species in this region, 0 species do not have any COI barcodes (from any region).

    Barcoding progress summary for the US-NE-LME region, out of a total of 11 possible species:
    • There are COI barcodes for 11 species ( 100% coverage ), of which 3 species have barcodes sampled inside this region ( 27% coverage ).
    • There are 12S barcodes for 5 species ( 45% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ). 
    • There are 16S barcodes for 9 species ( 81% coverage ), of which 1 species have barcodes sampled inside this region ( 9% coverage ).
    • There are 18S barcodes for 10 species ( 90% coverage ), of which 1 species have barcodes sampled inside this region ( 9% coverage ).
    • There are 28S barcodes for 9 species ( 81% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).


    click on map above to see a larger version


    MZGdb Data Download Options
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    Change Region   [ ICES North Atlantic & inland Seas ] [ ICES open-ocean Only ] [ Baltic Sea ] [ Mediterranean Sea ]
    [ ICES open-ocean WEST ] [ US-NE-LME ] [ CA-Scotian ] [ CA-Newfoundland-shelf ]
    [ ICES open-ocean EAST ] [ Norwegian-Sea ] [ North-Sea ] [ Ireland ] [ Iberian-Shelf ]

    Table Viewing Options   [ Species-only Summary, sorted by name (default) ]   or   [ Full Taxonomic Hierarchy ]   or   [ flat-text file of sorted species names ]


    Calanidae of the US-NE-LME
    Taxa Name

    Taxa
    Level
    Barcode
    Data?
    Number of
    Barcodes
    from
    any ocean
    Number of
    Barcodes
    from this region
    Barcode Locations and
    Species Occurence Map
    MZGdb Atlas
    v2.01


    2022-Jun-07
      Calanoides carinatus Species
    (1)
    COI
    12S
    16S
    18S
    28S
      COI = 60
      12S = 0
      16S = 1
      18S = 1
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000099


    R:1:0:0:0
      Calanus finmarchicus Species
    (2)
    COI
    12S
    16S
    18S
    28S
      COI = 8
      12S = 1
      16S = 34
      18S = 5
      28S = 2
      COI = 2
      12S = 0
      16S = 10
      18S = 1
      28S = 0
    accepted
    T4000005


    R:1:0:0:0
      Calanus glacialis Species
    (3)
    COI
    12S
    16S
    18S
    28S
      COI = 1009
      12S = 1
      16S = 1034
      18S = 3
      28S = 4
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000170


    R:1:0:0:0
      Calanus helgolandicus Species
    (4)
    COI
    12S
    16S
    18S
    28S
      COI = 119
      12S = 0
      16S = 59
      18S = 8
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000145


    R:1:0:0:0
      Calanus hyperboreus Species
    (5)
    COI
    12S
    16S
    18S
    28S
      COI = 30
      12S = 2
      16S = 8
      18S = 2
      28S = 2
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000122


    R:1:0:0:0
      Calanus marshallae Species
    (6)
    COI
    12S
    16S
    18S
    28S
      COI = 22
      12S = 0
      16S = 19
      18S = 0
      28S = 1
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4001969


    R:1:0:0:0
      Mesocalanus tenuicornis Species
    (7)
    COI
    12S
    16S
    18S
    28S
      COI = 12
      12S = 1
      16S = 3
      18S = 4
      28S = 4
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000125


    R:1:0:0:0
      Nannocalanus minor Species
    (8)
    COI
    12S
    16S
    18S
    28S
      COI = 43
      12S = 0
      16S = 2
      18S = 2
      28S = 14
      COI = 8
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000025


    R:1:0:0:0
      Neocalanus gracilis Species
    (9)
    COI
    12S
    16S
    18S
    28S
      COI = 7
      12S = 0
      16S = 0
      18S = 1
      28S = 5
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000048


    R:1:0:0:0
      Neocalanus robustior Species
    (10)
    COI
    12S
    16S
    18S
    28S
      COI = 13
      12S = 0
      16S = 0
      18S = 1
      28S = 2
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000214


    R:1:0:0:0
      Undinula vulgaris Species
    (11)
    COI
    12S
    16S
    18S
    28S
      COI = 40
      12S = 1
      16S = 1
      18S = 5
      28S = 2
      COI = 2
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000056


    R:1:0:0:0
    MZGdb Atlas v2.01   2022-Jun-07









    Tue Jun 7 09:01:49 EDT 2022