MZGdb Atlas Salmoniformes (US-NE-LME)

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Salmoniformes of the US-NE-LME There are 8 species of Salmoniformes that are commonly found in the US-NE-LME. Information on the COI barcoding* status of these species is presented in the table below.*
MODE A	*All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):* Of the 8 total species, 6 of these species (75%) have COI barcodes (from this or any ocean). There are a total of 1299 "any ocean" COI barcode records available for this ocean and taxa group. All available taxa group COI barcodes will be included in the Mode A downloads.
MODE B	*Regional COI barcodes for this taxa group (includes only those collected in the* US-NE-LME region): Of the 8 total species, 2 of these species (25%*) have US-NE-LME-collected* COI barcodes. There are a total of 4 "US-NE-LME-collected" COI barcodes available for this taxa group. In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
Uncoded Species	Of the 8 total species in this region, 2 species do not have any COI barcodes (from any region).

Barcoding progress summary for the US-NE-LME region, out of a total of 8 possible species:

There are COI barcodes for 6 species ( 75% coverage ), of which 2 species have barcodes sampled inside this region ( 25% coverage ).

There are 12S barcodes for 6 species ( 75% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).

There are 16S barcodes for 6 species ( 75% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).

There are 18S barcodes for 7 species ( 87% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).

There are 28S barcodes for 1 species ( 12% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).

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Change Region [ ICES North Atlantic & inland Seas ] [ ICES open-ocean Only ] [ Baltic Sea ] [ Mediterranean Sea ]
[ ICES open-ocean WEST ] [ US-NE-LME ] [ CA-Scotian ] [ CA-Newfoundland-shelf ]
[ ICES open-ocean EAST ] [ Norwegian-Sea ] [ North-Sea ] [ Ireland ] [ Iberian-Shelf ]

Table Viewing Options [ Species-only Summary, sorted by name (default) ] or [ Full Taxonomic Hierarchy ] or [ flat-text file of sorted species names ]

Quality Control: I have removed 1 WoRMS-identified "non-marine" species,
which are not included in the Total Species count above. [ Show me a list of removed brackish species ]

Salmoniformes of the US-NE-LME

Taxa Name	Taxa Level	Barcode Data?	Number of Barcodes from *any* ocean	Number of Barcodes from *this region*	Barcode Locations and Species Occurence Map	MZGdb Atlas v2023-m01-12 2023-Jan-14
Salmoniformes	Order	cummulative sub-totals -------> for this Order	Total Species: 9 Sp. w/COI-Barcodes: 9 Total COI-Barcodes: 2365	Total Species: 9 Sp. w/COI-Barcodes: 3 Total COI-Barcodes: 5		accepted T5001185 R:1:1:1:0
⋄ Salmonidae	Family	cummulative sub-totals -------> for this Family	Total Species: 9 Sp. w/COI-Barcodes: 9 Total COI-Barcodes: 2365	Total Species: 9 Sp. w/COI-Barcodes: 3 Total COI-Barcodes: 5		accepted T5005920 R:1:1:1:0
⋄ ⋄ Coregoninae	Subfamily	cummulative sub-totals -------> for this Subfamily	Total Species: 2 Sp. w/COI-Barcodes: 2 Total COI-Barcodes: 361	Total Species: 2 Sp. w/COI-Barcodes: 0 Total COI-Barcodes: 0		accepted T5006110 R:1:1:1:0
⋄ ⋄ ⋄ Coregonus	Genus	cummulative sub-totals -------> for this Genus	Total Species: 2 Sp. w/COI-Barcodes: 2 Total COI-Barcodes: 361	Total Species: 2 Sp. w/COI-Barcodes: 0 Total COI-Barcodes: 0		accepted T5006237 R:1:1:1:0
⋄ ⋄ ⋄ ⋄ Coregonus huntsmani	Species (1)	COI 12S 16S 18S 28S	COI = 2 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5008639 R:1:1:1:0
⋄ ⋄ Salmoninae	Subfamily	cummulative sub-totals -------> for this Subfamily	Total Species: 7 Sp. w/COI-Barcodes: 7 Total COI-Barcodes: 2004	Total Species: 7 Sp. w/COI-Barcodes: 3 Total COI-Barcodes: 5		accepted T5006093 R:1:1:1:0
⋄ ⋄ ⋄ Oncorhynchus	Genus	cummulative sub-totals -------> for this Genus	Total Species: 3 Sp. w/COI-Barcodes: 3 Total COI-Barcodes: 994	Total Species: 3 Sp. w/COI-Barcodes: 2 Total COI-Barcodes: 4		accepted T5006238 R:1:1:1:0
⋄ ⋄ ⋄ ⋄ Oncorhynchus kisutch	Species (2)	COI 12S 16S 18S 28S	COI = 239 12S = 10 16S = 71 18S = 3 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5010896 R:1:1:1:0
⋄ ⋄ ⋄ ⋄ Oncorhynchus mykiss	Species (3)	COI 12S 16S 18S 28S	COI = 415 12S = 80 16S = 40 18S = 6 28S = 2	COI = 2 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5010898 R:1:1:1:0
⋄ ⋄ ⋄ ⋄ Oncorhynchus tshawytscha	Species (4)	COI 12S 16S 18S 28S	COI = 275 12S = 29 16S = 14 18S = 3 28S = 0	COI = 2 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5010900 R:1:1:1:0
⋄ ⋄ ⋄ Salmo	Genus	cummulative sub-totals -------> for this Genus	Total Species: 2 Sp. w/COI-Barcodes: 2 Total COI-Barcodes: 723	Total Species: 2 Sp. w/COI-Barcodes: 1 Total COI-Barcodes: 1		accepted T5006239 R:1:1:1:0
⋄ ⋄ ⋄ ⋄ Salmo salar	Species (5)	COI 12S 16S 18S 28S	COI = 398 12S = 29 16S = 38 18S = 4 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5012023 R:1:1:1:0
⋄ ⋄ ⋄ ⋄ Salmo trutta	Species (6)	COI 12S 16S 18S 28S	COI = 289 12S = 42 16S = 101 18S = 6 28S = 0	COI = 1 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5012032 R:1:1:1:0
⋄ ⋄ ⋄ Salvelinus	Genus	cummulative sub-totals -------> for this Genus	Total Species: 2 Sp. w/COI-Barcodes: 2 Total COI-Barcodes: 287	Total Species: 2 Sp. w/COI-Barcodes: 0 Total COI-Barcodes: 0		accepted T5006240 R:1:1:1:0
⋄ ⋄ ⋄ ⋄ Salvelinus alpinus	Species (7)	COI 12S 16S 18S 28S	COI = 152 12S = 115 16S = 159 18S = 2 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5012036 R:1:1:1:0
⋄ ⋄ ⋄ ⋄ Salvelinus fontinalis	Species (8)	COI 12S 16S 18S 28S	COI = 86 12S = 15 16S = 17 18S = 1 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0		accepted T5012043 R:1:1:1:0

MZGdb Atlas [ database-version = v2023-m01-12 ]; html-date = 2023-Jan-14

Sat Jan 14 22:16:37 EST 2023