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Salmoniformes
of the
US-NE-LME
There are
8
species of
Salmoniformes
that are commonly found in the
US-NE-LME
.
Information on the
COI barcoding
status of these species is presented in the table below.
MODE
A
All available COI barcodes for this taxa group (
collected from
any
ocean or without geo-referencing
):
Of the 8 total species, only
8
species (
100%
) have COI barcodes (from this or any ocean).
There are a total of
1447
"
any ocean
" COI barcode records available for this ocean and taxa group.
All available taxa group COI barcodes will be included in the
Mode A
downloads.
MODE
B
Regional COI barcodes for this taxa group (
includes
only
those collected in the
US-NE-LME region):
Of the 8 total species, only
1
species (
12%
) have
US-NE-LME-collected
COI barcodes.
There are a total of
5
"
US-NE-LME-collected
" COI barcodes available for this taxa group.
In the map to the right,
Red Stars
show sampling locations of the COI barcodes in the
Mode B
download.
Uncoded
Species
Of the 8 total species in this region,
0
species do not have any
COI
barcodes
(from any region).
Barcoding progress summary for the
US-NE-LME
region, out of a total of
8
possible species:
There are
COI
barcodes for 8 species ( 100% coverage ). Only 1 species have barcodes sampled inside this region ( 12% coverage ).
There are
12S
barcodes for 7 species ( 87% coverage ). Only 0 species have barcodes sampled inside this region ( 0% ).
There are
16S
barcodes for 7 species ( 87% coverage ). Only 0 species have barcodes sampled inside this region ( 0% ).
There are
18S
barcodes for 7 species ( 87% coverage ). Only 0 species have barcodes sampled inside this region ( 0% ).
There are
28S
barcodes for 1 species ( 12% coverage ). Only 0 species have barcodes sampled inside this region ( 0% ).
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Table Viewing Options
[
Species-only Summary, sorted by name
(default) ]
or
[
Full Taxonomic Hierarchy
]
or
[
flat-text file of sorted species names
]
Quality Control:
I have removed
1
WoRMS-identified "
non-marine
" species,
which are
not
included in the Total Species count above.
[
Show me a list of removed brackish species
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Salmoniformes
of the
US-NE-LME
Taxa Name
Taxa
Level
Barcode
Data?
Number of
Barcodes
from
any
ocean
Number of
Barcodes
from
this region
Barcode Locations and
Species Occurence Map
MZGdb Atlas
v2.01
2022-Mar-10
Salmoniformes
Order
cummulative
sub-totals
------->
for this
Order
Total Species: 10
Sp. w/COI-Barcodes: 10
Total COI-Barcodes: 1990
Total Species: 10
Sp. w/COI-Barcodes: 3
Total COI-Barcodes: 5
accepted
T5001185
R:1:1:1:0
⋄
Salmonidae
Family
cummulative
sub-totals
------->
for this
Family
Total Species: 10
Sp. w/COI-Barcodes: 10
Total COI-Barcodes: 1990
Total Species: 10
Sp. w/COI-Barcodes: 3
Total COI-Barcodes: 5
accepted
T5005920
R:1:1:1:0
⋄ ⋄
Coregoninae
Subfamily
cummulative
sub-totals
------->
for this
Subfamily
Total Species: 2
Sp. w/COI-Barcodes: 2
Total COI-Barcodes: 273
Total Species: 2
Sp. w/COI-Barcodes: 0
Total COI-Barcodes: 0
accepted
T5006110
R:1:1:1:0
⋄ ⋄ ⋄
Coregonus
Genus
cummulative
sub-totals
------->
for this
Genus
Total Species: 2
Sp. w/COI-Barcodes: 2
Total COI-Barcodes: 273
Total Species: 2
Sp. w/COI-Barcodes: 0
Total COI-Barcodes: 0
accepted
T5006237
R:1:1:1:0
⋄ ⋄ ⋄ ⋄
Coregonus huntsmani
Species
(1)
COI
12S
16S
18S
28S
COI = 2
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T5008639
R:1:1:1:0
⋄ ⋄
Salmoninae
Subfamily
cummulative
sub-totals
------->
for this
Subfamily
Total Species: 8
Sp. w/COI-Barcodes: 8
Total COI-Barcodes: 1717
Total Species: 8
Sp. w/COI-Barcodes: 3
Total COI-Barcodes: 5
accepted
T5006093
R:1:1:1:0
⋄ ⋄ ⋄
Oncorhynchus
Genus
cummulative
sub-totals
------->
for this
Genus
Total Species: 3
Sp. w/COI-Barcodes: 3
Total COI-Barcodes: 896
Total Species: 3
Sp. w/COI-Barcodes: 2
Total COI-Barcodes: 4
accepted
T5006238
R:1:1:1:0
⋄ ⋄ ⋄ ⋄
Oncorhynchus kisutch
Species
(2)
COI
12S
16S
18S
28S
COI = 233
12S = 7
16S = 68
18S = 3
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T5010896
R:1:1:1:0
⋄ ⋄ ⋄ ⋄
Oncorhynchus mykiss
Species
(3)
COI
12S
16S
18S
28S
COI = 397
12S = 80
16S = 40
18S = 6
28S = 2
COI = 2
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T5010898
R:1:1:1:0
⋄ ⋄ ⋄ ⋄
Oncorhynchus tshawytscha
Species
(4)
COI
12S
16S
18S
28S
COI = 266
12S = 24
16S = 9
18S = 3
28S = 0
COI = 2
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T5010900
R:1:1:1:0
⋄ ⋄ ⋄
Salmo
Genus
cummulative
sub-totals
------->
for this
Genus
Total Species: 2
Sp. w/COI-Barcodes: 2
Total COI-Barcodes: 585
Total Species: 2
Sp. w/COI-Barcodes: 1
Total COI-Barcodes: 1
accepted
T5006239
R:1:1:1:0
⋄ ⋄ ⋄ ⋄
Salmo salar
Species
(5)
COI
12S
16S
18S
28S
COI = 337
12S = 29
16S = 38
18S = 4
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T5012023
R:1:1:1:0
⋄ ⋄ ⋄ ⋄
Salmo trutta
Species
(6)
COI
12S
16S
18S
28S
COI = 248
12S = 22
16S = 29
18S = 6
28S = 0
COI = 1
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T5012032
R:1:1:1:0
⋄ ⋄ ⋄
Salvelinus
Genus
cummulative
sub-totals
------->
for this
Genus
Total Species: 3
Sp. w/COI-Barcodes: 3
Total COI-Barcodes: 236
Total Species: 3
Sp. w/COI-Barcodes: 0
Total COI-Barcodes: 0
accepted
T5006240
R:1:1:1:0
⋄ ⋄ ⋄ ⋄
Salvelinus alpinus
Species
(7)
COI
12S
16S
18S
28S
COI = 161
12S = 115
16S = 159
18S = 2
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T5012036
R:1:1:1:0
⋄ ⋄ ⋄ ⋄ ⋄
Salvelinus alpinus alpinus
* All data are included in
the Species level above.
Subspecies
COI
12S
16S
18S
28S
COI = 10
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T5014005
R:1:1:1:0
⋄ ⋄ ⋄ ⋄
Salvelinus fontinalis
Species
(8)
COI
12S
16S
18S
28S
COI = 75
12S = 9
16S = 11
18S = 1
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T5012043
R:1:1:1:0
MZGdb Atlas v2.01
2022-Mar-10
Thu Mar 10 12:15:14 EST 2022