W
G
I
M
T
/
M
E
T
A
Z
O
O
G
E
N
E
Scolecitrichidae
of the
ICES Open-ocean WEST
There are
18
species of
Scolecitrichidae
that are commonly found in the
ICES Open-ocean WEST
.
Information on the
COI barcoding
status of these species is presented in the table below.
MODE
A
All available COI barcodes for this taxa group (
collected from
any
ocean and/or without geo-referencing
):
Of the 18 total species,
7
of these species (
38%
) have COI barcodes (from this or any ocean).
There are a total of
50
"
any ocean
" COI barcode records available for this ocean and taxa group.
All available taxa group COI barcodes will be included in the
Mode A
downloads.
MODE
B
Regional COI barcodes for this taxa group (
includes
only
those collected in the
ICES Open-ocean WEST region):
Of the 18 total species,
1
of these species (
5%
) have
ICES Open-ocean WEST-collected
COI barcodes.
There are a total of
1
"
ICES Open-ocean WEST-collected
" COI barcodes available for this taxa group.
In the map to the right,
Red Stars
show sampling locations of the COI barcodes in the
Mode B
download.
Uncoded
Species
Of the 18 total species in this region,
11
species do not have any
COI
barcodes
(from any region).
Barcoding progress summary for the
ICES Open-ocean WEST
region, out of a total of
18
possible species:
There are
COI
barcodes for 7 species ( 38% coverage ), of which 1 species have barcodes sampled inside this region ( 5% coverage ).
There are
12S
barcodes for 5 species ( 27% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
There are
16S
barcodes for 8 species ( 44% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
There are
18S
barcodes for 4 species ( 22% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
There are
28S
barcodes for 6 species ( 33% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
[
back to Previous page
|
back to
ICES Open-ocean WEST
main page
]
click on map above to see a larger version
MZGdb Data Download Options
--->
CLICK HERE
<---
Change Region
[
ICES North Atlantic & inland Seas
]
[
ICES open-ocean Only
]
[
Baltic Sea
]
[
Mediterranean Sea
]
[
ICES open-ocean WEST
]
[
US-NE-LME
]
[
CA-Scotian
]
[
CA-Newfoundland-shelf
]
[
ICES open-ocean EAST
]
[
Norwegian-Sea
]
[
North-Sea
]
[
Ireland
]
[
Iberian-Shelf
]
Table Viewing Options
[
Species-only Summary, sorted by name
(default) ]
or
[
Full Taxonomic Hierarchy
]
or
[
flat-text file of sorted species names
]
Scolecitrichidae
of the
ICES Open-ocean WEST
Taxa Name
Taxa
Level
Barcode
Data?
Number of
Barcodes
from
any
ocean
Number of
Barcodes
from
this region
Barcode Locations and
Species Occurence Map
MZGdb Atlas
v2023-m01-12
2023-Jan-14
Scolecitrichidae
Family
cummulative
sub-totals
------->
for this
Family
Total Species: 18
Sp. w/COI-Barcodes: 7
Total COI-Barcodes: 50
Total Species: 18
Sp. w/COI-Barcodes: 1
Total COI-Barcodes: 1
accepted
T4000769
R:1:0:0:0
⋄
Amallothrix
Genus
cummulative
sub-totals
------->
for this
Genus
Total Species: 2
Sp. w/COI-Barcodes: 0
Total COI-Barcodes: 0
Total Species: 2
Sp. w/COI-Barcodes: 0
Total COI-Barcodes: 0
accepted
T4000325
R:1:0:0:0
⋄ ⋄
Amallothrix gracilis
Species
(1)
COI
12S
16S
18S
28S
COI = 0
12S = 0
16S = 1
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4017872
R:1:0:0:0
⋄ ⋄
Amallothrix valida
Species
(2)
COI
12S
16S
18S
28S
COI = 0
12S = 1
16S = 1
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000577
R:1:0:0:0
⋄
Lophothrix
Genus
cummulative
sub-totals
------->
for this
Genus
Total Species: 2
Sp. w/COI-Barcodes: 0
Total COI-Barcodes: 0
Total Species: 2
Sp. w/COI-Barcodes: 0
Total COI-Barcodes: 0
accepted
T4000756
R:1:0:0:0
⋄ ⋄
Lophothrix frontalis
Species
(3)
COI
12S
16S
18S
28S
COI = 0
12S = 1
16S = 1
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000544
R:1:0:0:0
⋄ ⋄
Lophothrix latipes
Species
(4)
No barcodes?
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000781
R:1:0:0:0
⋄
Pseudoamallothrix
Genus
cummulative
sub-totals
------->
for this
Genus
Total Species: 2
Sp. w/COI-Barcodes: 1
Total COI-Barcodes: 1
Total Species: 2
Sp. w/COI-Barcodes: 0
Total COI-Barcodes: 0
accepted
T4003502
R:1:0:0:0
⋄ ⋄
Pseudoamallothrix emarginata
Species
(5)
COI
12S
16S
18S
28S
COI = 1
12S = 0
16S = 1
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4004196
R:1:0:0:0
⋄ ⋄
Pseudoamallothrix ovata
Species
(6)
No barcodes?
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000456
R:1:0:0:0
⋄
Racovitzanus
Genus
cummulative
sub-totals
------->
for this
Genus
Total Species: 1
Sp. w/COI-Barcodes: 1
Total COI-Barcodes: 1
Total Species: 1
Sp. w/COI-Barcodes: 0
Total COI-Barcodes: 0
accepted
T4000825
R:1:0:0:0
⋄ ⋄
Racovitzanus antarcticus
Species
(7)
COI
12S
16S
18S
28S
COI = 1
12S = 1
16S = 1
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000307
R:1:0:0:0
⋄
Scaphocalanus
Genus
cummulative
sub-totals
------->
for this
Genus
Total Species: 5
Sp. w/COI-Barcodes: 2
Total COI-Barcodes: 24
Total Species: 5
Sp. w/COI-Barcodes: 0
Total COI-Barcodes: 0
accepted
T4000155
R:1:0:0:0
⋄ ⋄
Scaphocalanus brevicornis
Species
(8)
COI
12S
16S
18S
28S
COI = 6
12S = 0
16S = 0
18S = 0
28S = 1
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000290
R:1:0:0:0
⋄ ⋄
Scaphocalanus echinatus
Species
(9)
COI
12S
16S
18S
28S
COI = 0
12S = 1
16S = 1
18S = 0
28S = 2
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000462
R:1:0:0:0
⋄ ⋄
Scaphocalanus elongatus
Species
(10)
No barcodes?
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000593
R:1:0:0:0
⋄ ⋄
Scaphocalanus magnus
Species
(11)
COI
12S
16S
18S
28S
COI = 18
12S = 0
16S = 1
18S = 2
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000332
R:1:0:0:0
⋄ ⋄
Scaphocalanus medius
Species
(12)
No barcodes?
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000540
R:1:0:0:0
⋄
Scolecithricella
Genus
cummulative
sub-totals
------->
for this
Genus
Total Species: 2
Sp. w/COI-Barcodes: 1
Total COI-Barcodes: 18
Total Species: 2
Sp. w/COI-Barcodes: 1
Total COI-Barcodes: 1
accepted
T4000115
R:1:0:0:0
⋄ ⋄
Scolecithricella abyssalis
Species
(13)
No barcodes?
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000385
R:1:0:0:0
⋄ ⋄
Scolecithricella minor
alternate_representation
Species
(14)
COI
12S
16S
18S
28S
COI = 18
12S = 0
16S = 0
18S = 2
28S = 2
COI = 1
12S = 0
16S = 0
18S = 0
28S = 0
alternate_representation
T4000221
R:1:0:0:0
⋄
Scolecithrix
Genus
cummulative
sub-totals
------->
for this
Genus
Total Species: 2
Sp. w/COI-Barcodes: 1
Total COI-Barcodes: 4
Total Species: 2
Sp. w/COI-Barcodes: 0
Total COI-Barcodes: 0
accepted
T4000396
R:1:0:0:0
⋄ ⋄
Scolecithrix bradyi
Species
(15)
COI
12S
16S
18S
28S
COI = 0
12S = 0
16S = 0
18S = 1
28S = 2
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000213
R:1:0:0:0
⋄ ⋄
Scolecithrix danae
Species
(16)
COI
12S
16S
18S
28S
COI = 4
12S = 0
16S = 0
18S = 3
28S = 5
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000059
R:1:0:0:0
⋄
Scottocalanus
Genus
cummulative
sub-totals
------->
for this
Genus
Total Species: 2
Sp. w/COI-Barcodes: 1
Total COI-Barcodes: 2
Total Species: 2
Sp. w/COI-Barcodes: 0
Total COI-Barcodes: 0
accepted
T4000292
R:1:0:0:0
⋄ ⋄
Scottocalanus persecans
Species
(17)
No barcodes?
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000846
R:1:0:0:0
⋄ ⋄
Scottocalanus securifrons
Species
(18)
COI
12S
16S
18S
28S
COI = 2
12S = 2
16S = 2
18S = 0
28S = 2
COI = 0
12S = 0
16S = 0
18S = 0
28S = 0
accepted
T4000631
R:1:0:0:0
MZGdb Atlas
[ database-version =
v2023-m01-12
]; html-date =
2023-Jan-14
Sat Jan 14 22:11:47 EST 2023
