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Scolecitrichidae of the ICES Open Ocean

There are 29 species of Scolecitrichidae that are commonly found in the ICES Open Ocean.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A
All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 29 total species, 8 of these species (27%) have COI barcodes (from this or any ocean).
  • There are a total of 52 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
  • MODE
    B
    Regional COI barcodes for this taxa group (includes only those collected in the ICES Open Ocean region):
  • Of the 29 total species, 3 of these species (10%) have ICES Open Ocean-collected COI barcodes.
  • There are a total of 20 "ICES Open Ocean-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
  • Uncoded
    Species
    Of the 29 total species in this region, 21 species do not have any COI barcodes (from any region).

    Barcoding progress summary for the ICES Open Ocean region, out of a total of 29 possible species:
    • There are COI barcodes for 8 species ( 27% coverage ), of which 3 species have barcodes sampled inside this region ( 10% coverage ).
    • There are 12S barcodes for 5 species ( 17% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ). 
    • There are 16S barcodes for 10 species ( 34% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 18S barcodes for 5 species ( 17% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 28S barcodes for 7 species ( 24% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).


    click on map above to see a larger version


    MZGdb Data Download Options
    ---> CLICK HERE <---



    Change Region   [ ICES North Atlantic & inland Seas ] [ ICES open-ocean Only ] [ Baltic Sea ] [ Mediterranean Sea ]
    [ ICES open-ocean WEST ] [ US-NE-LME ] [ CA-Scotian ] [ CA-Newfoundland-shelf ]
    [ ICES open-ocean EAST ] [ Norwegian-Sea ] [ North-Sea ] [ Ireland ] [ Iberian-Shelf ]

    Table Viewing Options   [ Species-only Summary, sorted by name (default) ]   or   [ Full Taxonomic Hierarchy ]   or   [ flat-text file of sorted species names ]


    Scolecitrichidae of the ICES Open Ocean
    Taxa Name

    Taxa
    Level
    Barcode
    Data?
    Number of
    Barcodes
    from
    any ocean
    Number of
    Barcodes
    from this region
    Barcode Locations and
    Species Occurence Map
    MZGdb Atlas
    v2.01


    2022-Jun-07
    Scolecitrichidae Family cummulative
    sub-totals
    ------->
    for this
    Family
    Total Species:   29
    Sp. w/COI-Barcodes:  8

    Total COI-Barcodes:   52
    Total Species:   29
    Sp. w/COI-Barcodes:  3

    Total COI-Barcodes:   20
    accepted
    T4000769


    R:1:0:0:0
    ⋄   Amallothrix Genus cummulative
    sub-totals
    ------->
    for this
    Genus
    Total Species:   4
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0
    Total Species:   4
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0
    accepted
    T4000325


    R:1:0:0:0
    ⋄   ⋄   Amallothrix falcifer Species
    (1)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4001067


    R:1:0:0:0
    ⋄   ⋄   Amallothrix gracilis Species
    (2)
    COI
    12S
    16S
    18S
    28S
      COI = 0
      12S = 0
      16S = 1
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4017872


    R:1:0:0:0
    ⋄   ⋄   Amallothrix propinqua Species
    (3)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000571


    R:1:0:0:0
    ⋄   ⋄   Amallothrix valida Species
    (4)
    COI
    12S
    16S
    18S
    28S
      COI = 0
      12S = 1
      16S = 1
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000577


    R:1:0:0:0
    ⋄   Falsilandrumius Genus cummulative
    sub-totals
    ------->
    for this
    Genus
    Total Species:   1
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0
    Total Species:   1
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0
    accepted
    T4017362


    R:1:0:0:0
    ⋄   ⋄   Falsilandrumius angulifrons Species
    (5)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4018741


    R:1:0:0:0
    ⋄   Lophothrix Genus cummulative
    sub-totals
    ------->
    for this
    Genus
    Total Species:   2
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0
    Total Species:   2
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0
    accepted
    T4000756


    R:1:0:0:0
    ⋄   ⋄   Lophothrix frontalis Species
    (6)
    COI
    12S
    16S
    18S
    28S
      COI = 0
      12S = 1
      16S = 1
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000544


    R:1:0:0:0
    ⋄   ⋄   Lophothrix latipes Species
    (7)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000781


    R:1:0:0:0
    ⋄   Pseudoamallothrix Genus cummulative
    sub-totals
    ------->
    for this
    Genus
    Total Species:   3
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   1
    Total Species:   3
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0
    accepted
    T4003502


    R:1:0:0:0
    ⋄   ⋄   Pseudoamallothrix emarginata Species
    (8)
    COI
    12S
    16S
    18S
    28S
      COI = 1
      12S = 0
      16S = 1
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4004196


    R:1:0:0:0
    ⋄   ⋄   Pseudoamallothrix laminata Species
    (9)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4019921


    R:1:0:0:0
    ⋄   ⋄   Pseudoamallothrix ovata Species
    (10)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000456


    R:1:0:0:0
    ⋄   Pseudophaenna Genus cummulative
    sub-totals
    ------->
    for this
    Genus
    Total Species:   1
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0
    Total Species:   1
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0
    accepted
    T4004040


    R:1:0:0:0
    ⋄   ⋄   Pseudophaenna typica Species
    (11)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4004205


    R:1:0:0:0
    ⋄   Racovitzanus Genus cummulative
    sub-totals
    ------->
    for this
    Genus
    Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   1
    Total Species:   1
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0
    accepted
    T4000825


    R:1:0:0:0
    ⋄   ⋄   Racovitzanus antarcticus Species
    (12)
    COI
    12S
    16S
    18S
    28S
      COI = 1
      12S = 1
      16S = 1
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000307


    R:1:0:0:0
    ⋄   Scaphocalanus Genus cummulative
    sub-totals
    ------->
    for this
    Genus
    Total Species:   8
    Sp. w/COI-Barcodes:  3

    Total COI-Barcodes:   25
    Total Species:   8
    Sp. w/COI-Barcodes:  2

    Total COI-Barcodes:   7
    accepted
    T4000155


    R:1:0:0:0
    ⋄   ⋄   Scaphocalanus affinis Species
    (13)
    COI
    12S
    16S
    18S
    28S
      COI = 0
      12S = 0
      16S = 2
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000896


    R:1:0:0:0
    ⋄   ⋄   Scaphocalanus brevicornis Species
    (14)
    COI
    12S
    16S
    18S
    28S
      COI = 6
      12S = 0
      16S = 0
      18S = 0
      28S = 1
      COI = 1
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000290


    R:1:0:0:0
    ⋄   ⋄   Scaphocalanus curtus Species
    (15)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000536


    R:1:0:0:0
    ⋄   ⋄   Scaphocalanus echinatus Species
    (16)
    COI
    12S
    16S
    18S
    28S
      COI = 0
      12S = 1
      16S = 1
      18S = 0
      28S = 2
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000462


    R:1:0:0:0
    ⋄   ⋄   Scaphocalanus elongatus Species
    (17)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000593


    R:1:0:0:0
    ⋄   ⋄   Scaphocalanus magnus Species
    (18)
    COI
    12S
    16S
    18S
    28S
      COI = 18
      12S = 0
      16S = 1
      18S = 2
      28S = 0
      COI = 6
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000332


    R:1:0:0:0
    ⋄   ⋄   Scaphocalanus major Species
    (19)
    COI
    12S
    16S
    18S
    28S
      COI = 1
      12S = 0
      16S = 1
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4001352


    R:1:0:0:0
    ⋄   ⋄   Scaphocalanus medius Species
    (20)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000540


    R:1:0:0:0
    ⋄   Scolecithricella Genus cummulative
    sub-totals
    ------->
    for this
    Genus
    Total Species:   4
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   19
    Total Species:   4
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   13
    accepted
    T4000115


    R:1:0:0:0
    ⋄   ⋄   Scolecithricella abyssalis Species
    (21)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000385


    R:1:0:0:0
    ⋄   ⋄   Scolecithricella dentata Species
    (22)
    COI
    12S
    16S
    18S
    28S
      COI = 0
      12S = 0
      16S = 0
      18S = 2
      28S = 1
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000390


    R:1:0:0:0
    ⋄   ⋄   Scolecithricella minor
    alternate_representation
    Species
    (23)
    COI
    12S
    16S
    18S
    28S
      COI = 19
      12S = 0
      16S = 0
      18S = 2
      28S = 2
      COI = 13
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    alternate_representation
    T4000221


    R:1:0:0:0
    ⋄   ⋄   Scolecithricella vittata Species
    (24)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000549


    R:1:0:0:0
    ⋄   Scolecithrix Genus cummulative
    sub-totals
    ------->
    for this
    Genus
    Total Species:   2
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   4
    Total Species:   2
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0
    accepted
    T4000396


    R:1:0:0:0
    ⋄   ⋄   Scolecithrix bradyi Species
    (25)
    COI
    12S
    16S
    18S
    28S
      COI = 0
      12S = 0
      16S = 0
      18S = 1
      28S = 2
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000213


    R:1:0:0:0
    ⋄   ⋄   Scolecithrix danae Species
    (26)
    COI
    12S
    16S
    18S
    28S
      COI = 4
      12S = 0
      16S = 0
      18S = 2
      28S = 5
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000059


    R:1:0:0:0
    ⋄   Scottocalanus Genus cummulative
    sub-totals
    ------->
    for this
    Genus
    Total Species:   3
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   2
    Total Species:   3
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0
    accepted
    T4000292


    R:1:0:0:0
    ⋄   ⋄   Scottocalanus persecans Species
    (27)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000846


    R:1:0:0:0
    ⋄   ⋄   Scottocalanus securifrons Species
    (28)
    COI
    12S
    16S
    18S
    28S
      COI = 2
      12S = 2
      16S = 2
      18S = 0
      28S = 2
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4000631


    R:1:0:0:0
    ⋄   ⋄   Scottocalanus thori Species
    (29)
    No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
      COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    accepted
    T4004214


    R:1:0:0:0
    MZGdb Atlas v2.01   2022-Jun-07









    Tue Jun 7 08:57:57 EDT 2022