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Ophidiiformes of the Mediterranean Sea

There are 10 species of Ophidiiformes that are commonly found in the Mediterranean Sea.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A
All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 10 total species, 3 of these species (30%) have COI barcodes (from this or any ocean).
  • There are a total of 14 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
  • MODE
    B
    Regional COI barcodes for this taxa group (includes only those collected in the Mediterranean Sea region):
  • Of the 10 total species, 1 of these species (10%) have Mediterranean Sea-collected COI barcodes.
  • There are a total of 3 "Mediterranean Sea-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
  • Uncoded
    Species
    Of the 10 total species in this region, 7 species do not have any COI barcodes (from any region).

    Barcoding progress summary for the Mediterranean Sea region, out of a total of 10 possible species:
    • There are COI barcodes for 3 species ( 30% coverage ), of which 1 species have barcodes sampled inside this region ( 10% coverage ).
    • There are 12S barcodes for 1 species ( 10% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ). 
    • There are 16S barcodes for 1 species ( 10% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 18S barcodes for 1 species ( 10% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 28S barcodes for 0 species ( 0% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).


    click on map above to see a larger version


    Change Region   [ ICES North Atlantic & inland Seas ] [ ICES open-ocean Only ] [ Baltic Sea ] [ Mediterranean Sea ]
    [ ICES open-ocean WEST ] [ US-NE-LME ] [ CA-Scotian ] [ CA-Newfoundland-shelf ]
    [ ICES open-ocean EAST ] [ Norwegian-Sea ] [ North-Sea ] [ Ireland ] [ Iberian-Shelf ]
    -----> Click here to go back to the Group Summary page. <-----


    Ophidiiformes of the Mediterranean Sea

    MZGdb DATA FILE Mode-A

    COI barcodes = 14
    12S barcodes = 3
    16S barcodes = 2
    18S barcodes = 2
    28S barcodes = 0
    Mode-B

    COI barcodes = 3
    12S barcodes = 0
    16S barcodes = 0
    18S barcodes = 0
    28S barcodes = 0
    FASTA format MZGfasta-coi__T5001666__s22__A.fasta
    MZGfasta-12s__T5001666__s22__A.fasta
    MZGfasta-16s__T5001666__s22__A.fasta
    MZGfasta-18s__T5001666__s22__A.fasta
    (no 28s data)
    MZGfasta-coi__T5001666__s22__B.fasta
    (no 12s data)
    (no 16s data)
    (no 18s data)
    (no 28s data)
    MOTHUR hierarchy tree

    paired to the FASTA file above
    MZGmothur-coi__T5001666__s22__A.mothur
    MZGmothur-12s__T5001666__s22__A.mothur
    MZGmothur-16s__T5001666__s22__A.mothur
    MZGmothur-18s__T5001666__s22__A.mothur
    (no 28s data)
    MZGmothur-coi__T5001666__s22__B.mothur
    (no 12s data)
    (no 16s data)
    (no 18s data)
    (no 28s data)
    MZGdb v2.1

    "full format"

    go to
    Format Description
    CSV

    Excel-friendly full format
    comma-separated-values
    MZGdata-coi__T5001666__s22__A.csv
    MZGdata-12s__T5001666__s22__A.csv
    MZGdata-16s__T5001666__s22__A.csv
    MZGdata-18s__T5001666__s22__A.csv
    (no 28s data)
    MZGdata-coi__T5001666__s22__B.csv
    (no 12s data)
    (no 16s data)
    (no 18s data)
    (no 28s data)
    PSV

    pipe-separated-values
    MZGdata-coi__T5001666__s22__A.psv
    MZGdata-12s__T5001666__s22__A.psv
    MZGdata-16s__T5001666__s22__A.psv
    MZGdata-18s__T5001666__s22__A.psv
    (no 28s data)
    MZGdata-coi__T5001666__s22__B.psv
    (no 12s data)
    (no 16s data)
    (no 18s data)
    (no 28s data)


    MZGdb Atlas v2.01   2022-Oct-12









    Wed Oct 12 11:55:24 EDT 2022