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Gadiformes of the ICES Open Ocean

There are 103 species of Gadiformes that are commonly found in the ICES Open Ocean.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A
All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 103 total species, 85 of these species (82%) have COI barcodes (from this or any ocean).
  • There are a total of 3501 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
  • MODE
    B
    Regional COI barcodes for this taxa group (includes only those collected in the ICES Open Ocean region):
  • Of the 103 total species, 67 of these species (65%) have ICES Open Ocean-collected COI barcodes.
  • There are a total of 1407 "ICES Open Ocean-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
  • Uncoded
    Species
    Of the 103 total species in this region, 18 species do not have any COI barcodes (from any region).

    Barcoding progress summary for the ICES Open Ocean region, out of a total of 103 possible species:
    • There are COI barcodes for 85 species ( 82% coverage ), of which 67 species have barcodes sampled inside this region ( 65% coverage ).
    • There are 12S barcodes for 80 species ( 77% coverage ), of which 2 species have barcodes sampled inside this region ( 1% coverage ). 
    • There are 16S barcodes for 81 species ( 78% coverage ), of which 2 species have barcodes sampled inside this region ( 1% coverage ).
    • There are 18S barcodes for 12 species ( 11% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 28S barcodes for 14 species ( 13% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).


    click on map above to see a larger version


    Change Region   [ ICES North Atlantic & inland Seas ] [ ICES open-ocean Only ] [ Baltic Sea ] [ Mediterranean Sea ]
    [ ICES open-ocean WEST ] [ US-NE-LME ] [ CA-Scotian ] [ CA-Newfoundland-shelf ]
    [ ICES open-ocean EAST ] [ Norwegian-Sea ] [ North-Sea ] [ Ireland ] [ Iberian-Shelf ]
    -----> Click here to go back to the Group Summary page. <-----


    Gadiformes of the ICES Open Ocean

    MZGdb DATA FILE Mode-A

    COI barcodes = 3501
    12S barcodes = 556
    16S barcodes = 714
    18S barcodes = 42
    28S barcodes = 22
    Mode-B

    COI barcodes = 1407
    12S barcodes = 2
    16S barcodes = 76
    18S barcodes = 0
    28S barcodes = 0
    FASTA format MZGfasta-coi__T5000586__i2000__A.fasta
    MZGfasta-12s__T5000586__i2000__A.fasta
    MZGfasta-16s__T5000586__i2000__A.fasta
    MZGfasta-18s__T5000586__i2000__A.fasta
    MZGfasta-28s__T5000586__i2000__A.fasta
    MZGfasta-coi__T5000586__i2000__B.fasta
    MZGfasta-12s__T5000586__i2000__B.fasta
    MZGfasta-16s__T5000586__i2000__B.fasta
    (no 18s data)
    (no 28s data)
    MOTHUR hierarchy tree

    paired to the FASTA file above
    MZGmothur-coi__T5000586__i2000__A.mothur
    MZGmothur-12s__T5000586__i2000__A.mothur
    MZGmothur-16s__T5000586__i2000__A.mothur
    MZGmothur-18s__T5000586__i2000__A.mothur
    MZGmothur-28s__T5000586__i2000__A.mothur
    MZGmothur-coi__T5000586__i2000__B.mothur
    MZGmothur-12s__T5000586__i2000__B.mothur
    MZGmothur-16s__T5000586__i2000__B.mothur
    (no 18s data)
    (no 28s data)
    MZGdb v2.1

    "full format"

    go to
    Format Description
    CSV

    Excel-friendly full format
    comma-separated-values
    MZGdata-coi__T5000586__i2000__A.csv
    MZGdata-12s__T5000586__i2000__A.csv
    MZGdata-16s__T5000586__i2000__A.csv
    MZGdata-18s__T5000586__i2000__A.csv
    MZGdata-28s__T5000586__i2000__A.csv
    MZGdata-coi__T5000586__i2000__B.csv
    MZGdata-12s__T5000586__i2000__B.csv
    MZGdata-16s__T5000586__i2000__B.csv
    (no 18s data)
    (no 28s data)
    PSV

    pipe-separated-values
    MZGdata-coi__T5000586__i2000__A.psv
    MZGdata-12s__T5000586__i2000__A.psv
    MZGdata-16s__T5000586__i2000__A.psv
    MZGdata-18s__T5000586__i2000__A.psv
    MZGdata-28s__T5000586__i2000__A.psv
    MZGdata-coi__T5000586__i2000__B.psv
    MZGdata-12s__T5000586__i2000__B.psv
    MZGdata-16s__T5000586__i2000__B.psv
    (no 18s data)
    (no 28s data)


    MZGdb Atlas v2.01   2022-Oct-12









    Wed Oct 12 11:52:05 EDT 2022