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All Vertebrates of the North-Sea

[   ICES North Atlantic & inland Seas   ]
[   Open-ocean Only   ]
[   Open-ocean WEST   ]
[   Open-ocean EAST   ]
[   Baltic Sea   ]
[   Mediterranean Sea   ]
[   North-Sea   ]
[   Ireland   ]
[   Norwegian-Sea   ]
[   Iberian-Shelf   ]
[   US-NE-LME   ]
[   CA-Scotian   ]
[   CA-Newfoundland-shelf   ]


The data files below are full-taxa compilations that contain all taxa groups.   If you only want data from a single taxa group
(e.g., only barcodes for copepods or pteropods), follow the taxa group links found under main map pages.

The "All Invertebrates" files contain data from all of the zooplankton (crustacean+non-crustacean) and benthic taxa groups and subgroups.
The "All Vertebrates" files contain data from all of the fish and marine mammal taxa groups and subgroups.
The "All Marine Fauna Combo" files contain all data from the All Invertebrates and the All Vertebrates combined files.

The "World (All-World-Oceans)" geographic region includes data from all of the other ocean and seas sub-regions.

The "Mode-A" files contain species-only barcodes for species found in the current ocean, but those sequences may come from any other ocean.
The "Mode-B" files contain species-only barcodes sampled only in the current ocean for species found in the current ocean.
The "Mode-C" files contain genus and/or species sequences for species found in the current ocean, but those sequences may come from any other ocean.
The "Mode-D" files contain genus and/or species sequences sampled only in the current ocean for species found in the current ocean.

The entire MZGdb database is therefore available via the "All Plankton Combo (All-World-Oceans) Mode-A" data files.

MZGdb DATA FILES

Database-Version:   v2023-m01-12
Mode-A

COI barcodes = 13625
12s barcodes = 2852
16s barcodes = 3528
18s barcodes = 291
28s barcodes = 77
Mode-B

COI barcodes = 1065
12s barcodes = 0
16s barcodes = 113
18s barcodes = 0
28s barcodes = 0
Mode-C

COI barcodes = 16384
12s barcodes = 3666
16s barcodes = 4512
18s barcodes = 334
28s barcodes = 82
Mode-D

COI barcodes = 1074
12s barcodes = 0
16s barcodes = 114
18s barcodes = 0
28s barcodes = 0
FASTA file MZGdb fasta (mode-A)

COI | 12S | 16S | 18S | 28S

True "barcode" (species-only) data
from ANY ocean
(mode-A)
MZGdb fasta (mode-B)

COI | n/d | 16S | n/d | n/d

True "barcode" (species-only) data
from specific ocean
(mode-B)
MZGdb fasta (mode-C)

COI | 12S | 16S | 18S | 28S

Genus-spp and species data
from ANY ocean
(mode-C)
MZGdb fasta (mode-D)

COI | n/d | 16S | n/d | n/d

Genus-spp and species data
from specific ocean
(mode-D)
Mothur-formatted
Taxonomic Hierarchy file

(paired with FASTA file above)
MZGdb Mothur (mode-A)

COI | 12S | 16S | 18S | 28S

True "barcode" (species-only) data
from ANY ocean
(mode-A)
MZGdb Mothur (mode-B)

COI | n/d | 16S | n/d | n/d

True "barcode" (species-only) data
from specific ocean
(mode-B)
MZGdb Mothur (mode-C)

COI | 12S | 16S | 18S | 28S

Genus-spp and species data
from ANY ocean
(mode-C)
MZGdb Mothur (mode-D)

COI | n/d | 16S | n/d | n/d

Genus-spp and species data
from specific ocean
(mode-D)
MZGdb v3.0

"full format"

go to
Format Description
CSV

Excel-friendly full format
comma-separated-values
MZGdb CSV (mode-A)

COI | 12S | 16S | 18S | 28S

True "barcode" (species-only) data
from ANY ocean
(mode-A)
MZGdb CSV (mode-B)

COI | n/d | 16S | n/d | n/d

True "barcode" (species-only) data
from specific ocean
(mode-B)
MZGdb CSV (mode-C)

COI | 12S | 16S | 18S | 28S

Genus-spp and species data
from ANY ocean
(mode-C)
MZGdb CSV (mode-D)

COI | n/d | 16S | n/d | n/d

Genus-spp and species data
from specific ocean
(mode-D)
PSV

pipe-separated-values
MZGdb PSV (mode-A)

COI | 12S | 16S | 18S | 28S

True "barcode" (species-only) data
from ANY ocean
(mode-A)
MZGdb PSV (mode-B)

COI | n/d | 16S | n/d | n/d

True "barcode" (species-only) data
from specific ocean
(mode-B)
MZGdb PSV (mode-C)

COI | 12S | 16S | 18S | 28S

Genus-spp and species data
from ANY ocean
(mode-C)
MZGdb PSV (mode-D)

COI | n/d | 16S | n/d | n/d

Genus-spp and species data
from specific ocean
(mode-D)











Thu Jan 19 07:42:52 EST 2023