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Metridinidae of the South Atlantic

There are 15 species of Metridinidae that are commonly found in the South Atlantic.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A
All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 15 total species, 10 of these species (66%) have COI barcodes (from this or any ocean).
  • There are a total of 1611 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
  • MODE
    B
    Regional COI barcodes for this taxa group (includes only those collected in the South Atlantic region):
  • Of the 15 total species, 7 of these species (46%) have South Atlantic-collected COI barcodes.
  • There are a total of 242 "South Atlantic-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
  • Uncoded
    Species
    Of the 15 total species in this region, 5 species do not have any COI barcodes (from any region).

    Barcoding progress summary for the South Atlantic region, out of a total of 15 possible species:
    • There are COI barcodes for 10 species ( 66% coverage ), of which 7 species have barcodes sampled inside this region ( 46% coverage ).
    • There are 12S barcodes for 5 species ( 33% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ). 
    • There are 16S barcodes for 8 species ( 53% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 18S barcodes for 9 species ( 60% coverage ), of which 1 species have barcodes sampled inside this region ( 6% coverage ).
    • There are 28S barcodes for 9 species ( 60% coverage ), of which 1 species have barcodes sampled inside this region ( 6% coverage ).


    click on map above to see a larger version


    Change Region   [ World ] [ Arctic ] [ North Atlantic ] [ Baltic Sea ] [ Mediterranean Sea ] [ South Atlantic ]
    [ North Pacific ] [ South Pacific ] [ Indian Ocean ] [ Southern Ocean ] [ Australia subregion ]
    -----> Click here to go back to the Group Summary page. <-----


    Metridinidae of the South Atlantic

    MZGdb DATA FILE Mode-A

    COI barcodes = 1611
    12S barcodes = 5
    16S barcodes = 10
    18S barcodes = 28
    28S barcodes = 35
    Mode-B

    COI barcodes = 242
    12S barcodes = 0
    16S barcodes = 0
    18S barcodes = 7
    28S barcodes = 1
    FASTA format MZGfasta-coi__T4001873__o03__A.fasta
    MZGfasta-12s__T4001873__o03__A.fasta
    MZGfasta-16s__T4001873__o03__A.fasta
    MZGfasta-18s__T4001873__o03__A.fasta
    MZGfasta-28s__T4001873__o03__A.fasta
    MZGfasta-coi__T4001873__o03__B.fasta
    (no 12s data)
    (no 16s data)
    MZGfasta-18s__T4001873__o03__B.fasta
    MZGfasta-28s__T4001873__o03__B.fasta
    MOTHUR hierarchy tree

    paired to the FASTA file above
    MZGmothur-coi__T4001873__o03__A.mothur
    MZGmothur-12s__T4001873__o03__A.mothur
    MZGmothur-16s__T4001873__o03__A.mothur
    MZGmothur-18s__T4001873__o03__A.mothur
    MZGmothur-28s__T4001873__o03__A.mothur
    MZGmothur-coi__T4001873__o03__B.mothur
    (no 12s data)
    (no 16s data)
    MZGmothur-18s__T4001873__o03__B.mothur
    MZGmothur-28s__T4001873__o03__B.mothur
    MZGdb v2.1

    "full format"

    go to
    Format Description
    CSV

    Excel-friendly full format
    comma-separated-values
    MZGdata-coi__T4001873__o03__A.csv
    MZGdata-12s__T4001873__o03__A.csv
    MZGdata-16s__T4001873__o03__A.csv
    MZGdata-18s__T4001873__o03__A.csv
    MZGdata-28s__T4001873__o03__A.csv
    MZGdata-coi__T4001873__o03__B.csv
    (no 12s data)
    (no 16s data)
    MZGdata-18s__T4001873__o03__B.csv
    MZGdata-28s__T4001873__o03__B.csv
    PSV

    pipe-separated-values
    MZGdata-coi__T4001873__o03__A.psv
    MZGdata-12s__T4001873__o03__A.psv
    MZGdata-16s__T4001873__o03__A.psv
    MZGdata-18s__T4001873__o03__A.psv
    MZGdata-28s__T4001873__o03__A.psv
    MZGdata-coi__T4001873__o03__B.psv
    (no 12s data)
    (no 16s data)
    MZGdata-18s__T4001873__o03__B.psv
    MZGdata-28s__T4001873__o03__B.psv


    MZGdb Atlas v2.01   2022-Jun-06









    Mon Jun 6 14:15:08 EDT 2022