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Cnidaria of the Mediterranean Sea

There are 307 species of Cnidaria that are commonly found in the Mediterranean Sea.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A
All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 307 total species, 154 of these species (50%) have COI barcodes (from this or any ocean).
  • There are a total of 4769 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
  • MODE
    B
    Regional COI barcodes for this taxa group (includes only those collected in the Mediterranean Sea region):
  • Of the 307 total species, 32 of these species (10%) have Mediterranean Sea-collected COI barcodes.
  • There are a total of 522 "Mediterranean Sea-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
  • Uncoded
    Species
    Of the 307 total species in this region, 153 species do not have any COI barcodes (from any region).

    Barcoding progress summary for the Mediterranean Sea region, out of a total of 307 possible species:
    • There are COI barcodes for 154 species ( 50% coverage ), of which 32 species have barcodes sampled inside this region ( 10% coverage ).
    • There are 12S barcodes for 28 species ( 9% coverage ), of which 1 species have barcodes sampled inside this region ( 0% coverage ). 
    • There are 16S barcodes for 159 species ( 51% coverage ), of which 1 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 18S barcodes for 114 species ( 37% coverage ), of which 1 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 28S barcodes for 125 species ( 40% coverage ), of which 1 species have barcodes sampled inside this region ( 0% coverage ).


    click on map above to see a larger version


    Change Region   [ World ] [ Arctic ] [ North Atlantic ] [ Baltic Sea ] [ Mediterranean Sea ] [ South Atlantic ]
    [ North Pacific ] [ South Pacific ] [ Indian Ocean ] [ Southern Ocean ] [ Australia subregion ]
    -----> Click here to go back to the Group Summary page. <-----


    Cnidaria of the Mediterranean Sea

    MZGdb DATA FILE Mode-A

    COI barcodes = 4769
    12S barcodes = 113
    16S barcodes = 2090
    18S barcodes = 728
    28S barcodes = 1043
    Mode-B

    COI barcodes = 522
    12S barcodes = 2
    16S barcodes = 80
    18S barcodes = 19
    28S barcodes = 34
    FASTA format MZGfasta-coi__T4000200__s22__A.fasta
    MZGfasta-12s__T4000200__s22__A.fasta
    MZGfasta-16s__T4000200__s22__A.fasta
    MZGfasta-18s__T4000200__s22__A.fasta
    MZGfasta-28s__T4000200__s22__A.fasta
    MZGfasta-coi__T4000200__s22__B.fasta
    MZGfasta-12s__T4000200__s22__B.fasta
    MZGfasta-16s__T4000200__s22__B.fasta
    MZGfasta-18s__T4000200__s22__B.fasta
    MZGfasta-28s__T4000200__s22__B.fasta
    MOTHUR hierarchy tree

    paired to the FASTA file above
    MZGmothur-coi__T4000200__s22__A.mothur
    MZGmothur-12s__T4000200__s22__A.mothur
    MZGmothur-16s__T4000200__s22__A.mothur
    MZGmothur-18s__T4000200__s22__A.mothur
    MZGmothur-28s__T4000200__s22__A.mothur
    MZGmothur-coi__T4000200__s22__B.mothur
    MZGmothur-12s__T4000200__s22__B.mothur
    MZGmothur-16s__T4000200__s22__B.mothur
    MZGmothur-18s__T4000200__s22__B.mothur
    MZGmothur-28s__T4000200__s22__B.mothur
    MZGdb v2.1

    "full format"

    go to
    Format Description
    CSV

    Excel-friendly full format
    comma-separated-values
    MZGdata-coi__T4000200__s22__A.csv
    MZGdata-12s__T4000200__s22__A.csv
    MZGdata-16s__T4000200__s22__A.csv
    MZGdata-18s__T4000200__s22__A.csv
    MZGdata-28s__T4000200__s22__A.csv
    MZGdata-coi__T4000200__s22__B.csv
    MZGdata-12s__T4000200__s22__B.csv
    MZGdata-16s__T4000200__s22__B.csv
    MZGdata-18s__T4000200__s22__B.csv
    MZGdata-28s__T4000200__s22__B.csv
    PSV

    pipe-separated-values
    MZGdata-coi__T4000200__s22__A.psv
    MZGdata-12s__T4000200__s22__A.psv
    MZGdata-16s__T4000200__s22__A.psv
    MZGdata-18s__T4000200__s22__A.psv
    MZGdata-28s__T4000200__s22__A.psv
    MZGdata-coi__T4000200__s22__B.psv
    MZGdata-12s__T4000200__s22__B.psv
    MZGdata-16s__T4000200__s22__B.psv
    MZGdata-18s__T4000200__s22__B.psv
    MZGdata-28s__T4000200__s22__B.psv


    MZGdb Atlas v2.01   2022-Jun-06









    Mon Jun 6 16:28:20 EDT 2022