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Thecostraca-Cirripedia of the South Pacific

There are 182 species of Thecostraca-Cirripedia that are commonly found in the South Pacific.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A
All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 182 total species, 77 of these species (42%) have COI barcodes (from this or any ocean).
  • There are a total of 4546 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
  • MODE
    B
    Regional COI barcodes for this taxa group (includes only those collected in the South Pacific region):
  • Of the 182 total species, 6 of these species (3%) have South Pacific-collected COI barcodes.
  • There are a total of 68 "South Pacific-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
  • Uncoded
    Species
    Of the 182 total species in this region, 105 species do not have any COI barcodes (from any region).

    Barcoding progress summary for the South Pacific region, out of a total of 182 possible species:
    • There are COI barcodes for 77 species ( 42% coverage ), of which 6 species have barcodes sampled inside this region ( 3% coverage ).
    • There are 12S barcodes for 71 species ( 39% coverage ), of which 1 species have barcodes sampled inside this region ( 0% coverage ). 
    • There are 16S barcodes for 65 species ( 35% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 18S barcodes for 82 species ( 45% coverage ), of which 1 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 28S barcodes for 55 species ( 30% coverage ), of which 1 species have barcodes sampled inside this region ( 0% coverage ).


    click on map above to see a larger version


    Change Region   [ World ] [ Arctic ] [ North Atlantic ] [ Baltic Sea ] [ Mediterranean Sea ] [ South Atlantic ]
    [ North Pacific ] [ South Pacific ] [ Indian Ocean ] [ Southern Ocean ] [ Australia subregion ]
    -----> Click here to go back to the Group Summary page. <-----


    Thecostraca-Cirripedia of the South Pacific

    MZGdb DATA FILE Mode-A

    COI barcodes = 4546
    12S barcodes = 697
    16S barcodes = 545
    18S barcodes = 481
    28S barcodes = 234
    Mode-B

    COI barcodes = 68
    12S barcodes = 1
    16S barcodes = 0
    18S barcodes = 29
    28S barcodes = 29
    FASTA format MZGfasta-coi__T4000054__o06__A.fasta
    MZGfasta-12s__T4000054__o06__A.fasta
    MZGfasta-16s__T4000054__o06__A.fasta
    MZGfasta-18s__T4000054__o06__A.fasta
    MZGfasta-28s__T4000054__o06__A.fasta
    MZGfasta-coi__T4000054__o06__B.fasta
    MZGfasta-12s__T4000054__o06__B.fasta
    (no 16s data)
    MZGfasta-18s__T4000054__o06__B.fasta
    MZGfasta-28s__T4000054__o06__B.fasta
    MOTHUR hierarchy tree

    paired to the FASTA file above
    MZGmothur-coi__T4000054__o06__A.mothur
    MZGmothur-12s__T4000054__o06__A.mothur
    MZGmothur-16s__T4000054__o06__A.mothur
    MZGmothur-18s__T4000054__o06__A.mothur
    MZGmothur-28s__T4000054__o06__A.mothur
    MZGmothur-coi__T4000054__o06__B.mothur
    MZGmothur-12s__T4000054__o06__B.mothur
    (no 16s data)
    MZGmothur-18s__T4000054__o06__B.mothur
    MZGmothur-28s__T4000054__o06__B.mothur
    MZGdb v2.1

    "full format"

    go to
    Format Description
    CSV

    Excel-friendly full format
    comma-separated-values
    MZGdata-coi__T4000054__o06__A.csv
    MZGdata-12s__T4000054__o06__A.csv
    MZGdata-16s__T4000054__o06__A.csv
    MZGdata-18s__T4000054__o06__A.csv
    MZGdata-28s__T4000054__o06__A.csv
    MZGdata-coi__T4000054__o06__B.csv
    MZGdata-12s__T4000054__o06__B.csv
    (no 16s data)
    MZGdata-18s__T4000054__o06__B.csv
    MZGdata-28s__T4000054__o06__B.csv
    PSV

    pipe-separated-values
    MZGdata-coi__T4000054__o06__A.psv
    MZGdata-12s__T4000054__o06__A.psv
    MZGdata-16s__T4000054__o06__A.psv
    MZGdata-18s__T4000054__o06__A.psv
    MZGdata-28s__T4000054__o06__A.psv
    MZGdata-coi__T4000054__o06__B.psv
    MZGdata-12s__T4000054__o06__B.psv
    (no 16s data)
    MZGdata-18s__T4000054__o06__B.psv
    MZGdata-28s__T4000054__o06__B.psv


    MZGdb Atlas v2.01   2022-Jun-06









    Mon Jun 6 14:56:03 EDT 2022