M
E
T
A
Z
O
O
G
E
N
E
Mollusca-Cephalopoda of the Mediterranean Sea

There are 64 species of Mollusca-Cephalopoda that are commonly found in the Mediterranean Sea.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A
All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 64 total species, 57 of these species (89%) have COI barcodes (from this or any ocean).
  • There are a total of 2653 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
  • MODE
    B
    Regional COI barcodes for this taxa group (includes only those collected in the Mediterranean Sea region):
  • Of the 64 total species, 14 of these species (21%) have Mediterranean Sea-collected COI barcodes.
  • There are a total of 45 "Mediterranean Sea-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
  • Uncoded
    Species
    Of the 64 total species in this region, 7 species do not have any COI barcodes (from any region).

    Barcoding progress summary for the Mediterranean Sea region, out of a total of 64 possible species:
    • There are COI barcodes for 57 species ( 89% coverage ), of which 14 species have barcodes sampled inside this region ( 21% coverage ).
    • There are 12S barcodes for 36 species ( 56% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ). 
    • There are 16S barcodes for 50 species ( 78% coverage ), of which 1 species have barcodes sampled inside this region ( 1% coverage ).
    • There are 18S barcodes for 35 species ( 54% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 28S barcodes for 32 species ( 50% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).


    click on map above to see a larger version


    Change Region   [ World ] [ Arctic ] [ North Atlantic ] [ Baltic Sea ] [ Mediterranean Sea ] [ South Atlantic ]
    [ North Pacific ] [ South Pacific ] [ Indian Ocean ] [ Southern Ocean ] [ Australia subregion ]
    -----> Click here to go back to the Group Summary page. <-----


    Mollusca-Cephalopoda of the Mediterranean Sea

    MZGdb DATA FILE Mode-A

    COI barcodes = 2653
    12S barcodes = 162
    16S barcodes = 643
    18S barcodes = 88
    28S barcodes = 78
    Mode-B

    COI barcodes = 45
    12S barcodes = 0
    16S barcodes = 2
    18S barcodes = 0
    28S barcodes = 0
    FASTA format MZGfasta-coi__T4000043__s22__A.fasta
    MZGfasta-12s__T4000043__s22__A.fasta
    MZGfasta-16s__T4000043__s22__A.fasta
    MZGfasta-18s__T4000043__s22__A.fasta
    MZGfasta-28s__T4000043__s22__A.fasta
    MZGfasta-coi__T4000043__s22__B.fasta
    (no 12s data)
    MZGfasta-16s__T4000043__s22__B.fasta
    (no 18s data)
    (no 28s data)
    MOTHUR hierarchy tree

    paired to the FASTA file above
    MZGmothur-coi__T4000043__s22__A.mothur
    MZGmothur-12s__T4000043__s22__A.mothur
    MZGmothur-16s__T4000043__s22__A.mothur
    MZGmothur-18s__T4000043__s22__A.mothur
    MZGmothur-28s__T4000043__s22__A.mothur
    MZGmothur-coi__T4000043__s22__B.mothur
    (no 12s data)
    MZGmothur-16s__T4000043__s22__B.mothur
    (no 18s data)
    (no 28s data)
    MZGdb v2.1

    "full format"

    go to
    Format Description
    CSV

    Excel-friendly full format
    comma-separated-values
    MZGdata-coi__T4000043__s22__A.csv
    MZGdata-12s__T4000043__s22__A.csv
    MZGdata-16s__T4000043__s22__A.csv
    MZGdata-18s__T4000043__s22__A.csv
    MZGdata-28s__T4000043__s22__A.csv
    MZGdata-coi__T4000043__s22__B.csv
    (no 12s data)
    MZGdata-16s__T4000043__s22__B.csv
    (no 18s data)
    (no 28s data)
    PSV

    pipe-separated-values
    MZGdata-coi__T4000043__s22__A.psv
    MZGdata-12s__T4000043__s22__A.psv
    MZGdata-16s__T4000043__s22__A.psv
    MZGdata-18s__T4000043__s22__A.psv
    MZGdata-28s__T4000043__s22__A.psv
    MZGdata-coi__T4000043__s22__B.psv
    (no 12s data)
    MZGdata-16s__T4000043__s22__B.psv
    (no 18s data)
    (no 28s data)


    MZGdb Atlas v2.01   2022-Jun-06









    Mon Jun 6 15:17:55 EDT 2022